Protein–RNA interactions for Protein: Q99523

SORT1, Sortilin, humanhuman

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1Q99523 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SORT1Q99523 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SORT1Q99523 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SORT1Q99523 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SORT1Q99523 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.21■□□□□ 0.19
SORT1Q99523 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.21■□□□□ 0.19
SORT1Q99523 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SORT1Q99523 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.21■□□□□ 0.19
SORT1Q99523 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SORT1Q99523 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SORT1Q99523 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SORT1Q99523 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.21■□□□□ 0.18
SORT1Q99523 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.2■□□□□ 0.18
SORT1Q99523 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
SORT1Q99523 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SORT1Q99523 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
SORT1Q99523 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SORT1Q99523 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SORT1Q99523 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SORT1Q99523 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SORT1Q99523 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.2■□□□□ 0.18
SORT1Q99523 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.2■□□□□ 0.18
SORT1Q99523 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SORT1Q99523 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SORT1Q99523 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SORT1Q99523 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.2■□□□□ 0.18
SORT1Q99523 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SORT1Q99523 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SORT1Q99523 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.2■□□□□ 0.18
SORT1Q99523 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SORT1Q99523 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.2■□□□□ 0.18
SORT1Q99523 AC132008.2-207ENST00000454517 770 ntBASIC16.2■□□□□ 0.18
SORT1Q99523 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SORT1Q99523 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SORT1Q99523 AC106795.1-205ENST00000512851 1056 ntBASIC16.2■□□□□ 0.18
SORT1Q99523 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.2■□□□□ 0.18
SORT1Q99523 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.2■□□□□ 0.18
SORT1Q99523 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.2■□□□□ 0.18
SORT1Q99523 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.2■□□□□ 0.18
SORT1Q99523 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SORT1Q99523 AL589182.2-201ENST00000619332 1049 ntBASIC16.2■□□□□ 0.18
SORT1Q99523 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SORT1Q99523 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SORT1Q99523 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SORT1Q99523 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.2■□□□□ 0.18
SORT1Q99523 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SORT1Q99523 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SORT1Q99523 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SORT1Q99523 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.2■□□□□ 0.18
SORT1Q99523 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SORT1Q99523 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SORT1Q99523 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SORT1Q99523 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SORT1Q99523 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SORT1Q99523 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SORT1Q99523 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SORT1Q99523 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SORT1Q99523 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.19■□□□□ 0.18
SORT1Q99523 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SORT1Q99523 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SORT1Q99523 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SORT1Q99523 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SORT1Q99523 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.19■□□□□ 0.18
SORT1Q99523 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SORT1Q99523 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SORT1Q99523 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SORT1Q99523 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.19■□□□□ 0.18
SORT1Q99523 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.19■□□□□ 0.18
SORT1Q99523 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SORT1Q99523 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.19■□□□□ 0.18
SORT1Q99523 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.19■□□□□ 0.18
SORT1Q99523 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.19■□□□□ 0.18
SORT1Q99523 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.19■□□□□ 0.18
SORT1Q99523 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SORT1Q99523 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.19■□□□□ 0.18
SORT1Q99523 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SORT1Q99523 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SORT1Q99523 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SORT1Q99523 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SORT1Q99523 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.19■□□□□ 0.18
SORT1Q99523 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.19■□□□□ 0.18
SORT1Q99523 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SORT1Q99523 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SORT1Q99523 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.18■□□□□ 0.18
SORT1Q99523 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
SORT1Q99523 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
SORT1Q99523 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SORT1Q99523 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.18■□□□□ 0.18
SORT1Q99523 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SORT1Q99523 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SORT1Q99523 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SORT1Q99523 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.18■□□□□ 0.18
SORT1Q99523 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.18■□□□□ 0.18
SORT1Q99523 IER3-202ENST00000376377 1350 ntBASIC16.18■□□□□ 0.18
SORT1Q99523 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.18■□□□□ 0.18
SORT1Q99523 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SORT1Q99523 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SORT1Q99523 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SORT1Q99523 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SORT1Q99523 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms