Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 DUX4L17-201ENST00000557360 1267 ntBASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 AC112504.1-201ENST00000623415 1841 ntBASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.79■□□□□ 0.28
CHMP6Q96FZ7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 HOMER2P1-201ENST00000455653 964 ntBASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 AC092597.1-201ENST00000487352 616 ntBASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 CDC14C-201ENST00000428251 1719 ntBASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 AC073508.3-201ENST00000619697 1419 ntBASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 LINC02447-202ENST00000501888 2146 ntBASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 AC068587.6-202ENST00000641839 5619 ntBASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP6Q96FZ7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP6Q96FZ7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms