Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 MIR4492-201ENST00000581627 80 ntBASIC18.78■□□□□ 0.6
SMARCE1Q969G3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCE1Q969G3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 AL512652.2-201ENST00000625156 1716 ntBASIC18.77■□□□□ 0.6
SMARCE1Q969G3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 REXO1L3P-201ENST00000622202 1288 ntBASIC18.77■□□□□ 0.6
SMARCE1Q969G3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 AC132872.4-202ENST00000622924 2756 ntBASIC18.77■□□□□ 0.6
SMARCE1Q969G3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.77■□□□□ 0.6
SMARCE1Q969G3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SMARCE1Q969G3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
SMARCE1Q969G3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.77■□□□□ 0.59
SMARCE1Q969G3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.77■□□□□ 0.59
SMARCE1Q969G3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMARCE1Q969G3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 TSPY19P-201ENST00000418461 509 ntBASIC18.76■□□□□ 0.59
SMARCE1Q969G3 TSPY18P-201ENST00000441642 509 ntBASIC18.76■□□□□ 0.59
SMARCE1Q969G3 SCARNA2-201ENST00000458748 420 ntBASIC18.76■□□□□ 0.59
SMARCE1Q969G3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 AC091304.2-201ENST00000564639 760 ntBASIC18.76■□□□□ 0.59
SMARCE1Q969G3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCE1Q969G3 AC022188.1-201ENST00000620960 1664 ntBASIC18.76■□□□□ 0.59
SMARCE1Q969G3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCE1Q969G3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SMARCE1Q969G3 KRT8P39-201ENST00000396270 1433 ntBASIC18.75■□□□□ 0.59
SMARCE1Q969G3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.75■□□□□ 0.59
SMARCE1Q969G3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SMARCE1Q969G3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms