Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.35■□□□□ 0.05
CNOT9Q92600 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 AC108751.1-201ENST00000490852 363 ntBASIC15.35■□□□□ 0.05
CNOT9Q92600 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.35■□□□□ 0.05
CNOT9Q92600 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.35■□□□□ 0.05
CNOT9Q92600 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.35■□□□□ 0.05
CNOT9Q92600 AP001005.1-201ENST00000571755 1248 ntBASIC15.35■□□□□ 0.05
CNOT9Q92600 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.35■□□□□ 0.05
CNOT9Q92600 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CNOT9Q92600 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CNOT9Q92600 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.35■□□□□ 0.05
CNOT9Q92600 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 AL031731.1-201ENST00000642131 2094 ntBASIC15.35■□□□□ 0.05
CNOT9Q92600 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CNOT9Q92600 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CNOT9Q92600 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CNOT9Q92600 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CNOT9Q92600 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CNOT9Q92600 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.34■□□□□ 0.05
CNOT9Q92600 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
CNOT9Q92600 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.34■□□□□ 0.05
CNOT9Q92600 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.34■□□□□ 0.05
CNOT9Q92600 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
CNOT9Q92600 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CNOT9Q92600 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.34■□□□□ 0.05
CNOT9Q92600 TPM4P1-201ENST00000436100 807 ntBASIC15.34■□□□□ 0.05
CNOT9Q92600 FAM185BP-201ENST00000443595 716 ntBASIC15.34■□□□□ 0.05
CNOT9Q92600 UNC93B6-202ENST00000528242 690 ntBASIC15.34■□□□□ 0.05
CNOT9Q92600 MIR4751-201ENST00000578027 74 ntBASIC15.34■□□□□ 0.05
CNOT9Q92600 ACTL9-202ENST00000612068 1252 ntBASIC15.34■□□□□ 0.05
CNOT9Q92600 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.34■□□□□ 0.05
CNOT9Q92600 AC010654.1-201ENST00000615722 808 ntBASIC15.34■□□□□ 0.05
CNOT9Q92600 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CNOT9Q92600 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.34■□□□□ 0.05
CNOT9Q92600 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CNOT9Q92600 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 GGT4P-201ENST00000623672 1708 ntBASIC15.34■□□□□ 0.05
CNOT9Q92600 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CNOT9Q92600 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.34■□□□□ 0.05
CNOT9Q92600 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNOT9Q92600 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CNOT9Q92600 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CNOT9Q92600 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CNOT9Q92600 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNOT9Q92600 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
CNOT9Q92600 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNOT9Q92600 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CNOT9Q92600 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.33■□□□□ 0.05
CNOT9Q92600 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CNOT9Q92600 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNOT9Q92600 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.33■□□□□ 0.04
CNOT9Q92600 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CNOT9Q92600 HCG4-201ENST00000418983 998 ntBASIC15.33■□□□□ 0.04
CNOT9Q92600 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.33■□□□□ 0.04
CNOT9Q92600 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms