Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 AC142381.1-201ENST00000426099 345 ntBASIC19.5■□□□□ 0.71
STAG1Q8WVM7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 FOXO1B-201ENST00000504678 1527 ntBASIC19.5■□□□□ 0.71
STAG1Q8WVM7 ME2P1-201ENST00000426028 1970 ntBASIC19.5■□□□□ 0.71
STAG1Q8WVM7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.5■□□□□ 0.71
STAG1Q8WVM7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 TNRC18P3-201ENST00000441896 2691 ntBASIC19.49■□□□□ 0.71
STAG1Q8WVM7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 AC023141.5-201ENST00000458585 616 ntBASIC19.49■□□□□ 0.71
STAG1Q8WVM7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 HLA-J-203ENST00000494367 1087 ntBASIC19.49■□□□□ 0.71
STAG1Q8WVM7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 AC105233.2-201ENST00000523697 349 ntBASIC19.49■□□□□ 0.71
STAG1Q8WVM7 AF228730.5-201ENST00000530288 346 ntBASIC19.49■□□□□ 0.71
STAG1Q8WVM7 RFPL4AP1-201ENST00000530883 850 ntBASIC19.49■□□□□ 0.71
STAG1Q8WVM7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
STAG1Q8WVM7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 IGHV3-62-201ENST00000520057 340 ntBASIC19.48■□□□□ 0.71
STAG1Q8WVM7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
STAG1Q8WVM7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms