Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 AC016027.1-202ENST00000607927 1699 ntBASIC12.46□□□□□ -0.41
NUP35Q8NFH5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 TSPY14P-201ENST00000303979 915 ntBASIC12.46□□□□□ -0.41
NUP35Q8NFH5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 IGHGP-201ENST00000390555 1178 ntBASIC12.46□□□□□ -0.41
NUP35Q8NFH5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 RBM17P1-201ENST00000453646 1190 ntBASIC12.46□□□□□ -0.41
NUP35Q8NFH5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 FITM1-202ENST00000559294 800 ntBASIC12.46□□□□□ -0.41
NUP35Q8NFH5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 AC013467.2-201ENST00000605472 835 ntBASIC12.46□□□□□ -0.41
NUP35Q8NFH5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 AL359736.2-201ENST00000621992 437 ntBASIC12.46□□□□□ -0.41
NUP35Q8NFH5 AC073912.3-201ENST00000624414 853 ntBASIC12.46□□□□□ -0.41
NUP35Q8NFH5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.46□□□□□ -0.41
NUP35Q8NFH5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 AC023908.3-201ENST00000564211 3047 ntBASIC12.46□□□□□ -0.41
NUP35Q8NFH5 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NUP35Q8NFH5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
NUP35Q8NFH5 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NUP35Q8NFH5 REXO1L8P-201ENST00000604378 1897 ntBASIC12.46□□□□□ -0.42
NUP35Q8NFH5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NUP35Q8NFH5 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
NUP35Q8NFH5 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.46□□□□□ -0.42
NUP35Q8NFH5 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NUP35Q8NFH5 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
NUP35Q8NFH5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.46□□□□□ -0.42
NUP35Q8NFH5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 AC136621.1-201ENST00000624017 2304 ntBASIC12.45□□□□□ -0.42
NUP35Q8NFH5 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 AL390955.1-201ENST00000428694 934 ntBASIC12.45□□□□□ -0.42
NUP35Q8NFH5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.45□□□□□ -0.42
NUP35Q8NFH5 AC079602.3-201ENST00000623931 403 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms