Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 TUBB8P12-201ENST00000308911 1335 ntBASIC14.86□□□□□ -0.03
LRRC28Q86X40 TUBB7P-202ENST00000428444 1305 ntBASIC14.86□□□□□ -0.03
LRRC28Q86X40 TUBB8P7-204ENST00000567960 1332 ntBASIC14.86□□□□□ -0.03
LRRC28Q86X40 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 AC144831.1-201ENST00000573312 2656 ntBASIC14.86□□□□□ -0.03
LRRC28Q86X40 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC28Q86X40 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LRRC28Q86X40 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 AKR1C7P-201ENST00000305623 895 ntBASIC14.85□□□□□ -0.03
LRRC28Q86X40 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 COX5BP2-201ENST00000392354 334 ntBASIC14.85□□□□□ -0.03
LRRC28Q86X40 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 AC122714.2-201ENST00000502787 707 ntBASIC14.85□□□□□ -0.03
LRRC28Q86X40 AF238378.1-201ENST00000526806 358 ntBASIC14.85□□□□□ -0.03
LRRC28Q86X40 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 AL121912.1-201ENST00000603683 238 ntBASIC14.85□□□□□ -0.03
LRRC28Q86X40 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 AL136379.1-201ENST00000623471 2642 ntBASIC14.85□□□□□ -0.03
LRRC28Q86X40 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC28Q86X40 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.85□□□□□ -0.03
LRRC28Q86X40 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRC28Q86X40 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC28Q86X40 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms