Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 GGT4P-201ENST00000623672 1708 ntBASIC16.28■□□□□ 0.2
LRRTM4Q86VH4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 KRT18P32-201ENST00000424695 1287 ntBASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 LINC01225-203ENST00000563550 1244 ntBASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 UXT-AS1-201ENST00000590504 1525 ntBASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRTM4Q86VH4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRTM4Q86VH4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRTM4Q86VH4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
LRRTM4Q86VH4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRTM4Q86VH4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
LRRTM4Q86VH4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
LRRTM4Q86VH4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRTM4Q86VH4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
LRRTM4Q86VH4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 PRYP6-201ENST00000514804 343 ntBASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRTM4Q86VH4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LRRTM4Q86VH4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms