Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
LYSMD3Q7Z3D4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
LYSMD3Q7Z3D4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LYSMD3Q7Z3D4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
LYSMD3Q7Z3D4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 UPF3AP3-201ENST00000420996 769 ntBASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.7■□□□□ 0.26
LYSMD3Q7Z3D4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 AL078644.1-201ENST00000609881 752 ntBASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 AC091812.2-201ENST00000619081 385 ntBASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 AL031731.1-201ENST00000642131 2094 ntBASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 PCDHA1-201ENST00000378133 2726 ntBASIC16.69■□□□□ 0.26
LYSMD3Q7Z3D4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 PCDHA14-201ENST00000506751 2298 ntBASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 AC079328.2-201ENST00000561241 3354 ntBASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
LYSMD3Q7Z3D4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms