Protein–RNA interactions for Protein: Q5T4F4

ZFYVE27, Protrudin, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE27Q5T4F4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 KRT8P49-201ENST00000604166 1432 ntBASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 PI4KAP1-204ENST00000612579 1703 ntBASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZFYVE27Q5T4F4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 SAPCD2P3-201ENST00000455031 850 ntBASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 REXO1L6P-202ENST00000619970 1078 ntBASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 AC092364.2-201ENST00000596710 2692 ntBASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 DOC2GP-204ENST00000639052 2548 ntBASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZFYVE27Q5T4F4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
ZFYVE27Q5T4F4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms