Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 RNA5SP419-201ENST00000515908 135 ntBASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 AC148477.8-201ENST00000624298 468 ntBASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 PGM5P2-202ENST00000637225 1043 ntBASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCGF3Q3KNV8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 AC092364.2-201ENST00000596710 2692 ntBASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 AL590627.1-203ENST00000421194 1026 ntBASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 AC105339.3-201ENST00000560043 636 ntBASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 MIR1199-201ENST00000621445 119 ntBASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 NORAD-201ENST00000565493 5339 ntBASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCGF3Q3KNV8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCGF3Q3KNV8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PCGF3Q3KNV8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms