Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN2P57739 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN2P57739 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN2P57739 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN2P57739 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN2P57739 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN2P57739 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN2P57739 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CLDN2P57739 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CLDN2P57739 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN2P57739 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN2P57739 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CLDN2P57739 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CLDN2P57739 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN2P57739 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CLDN2P57739 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CLDN2P57739 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN2P57739 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN2P57739 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN2P57739 COX20P2-201ENST00000452636 358 ntBASIC16.34■□□□□ 0.21
CLDN2P57739 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN2P57739 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN2P57739 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.34■□□□□ 0.21
CLDN2P57739 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN2P57739 SPTSSB-204ENST00000617024 1292 ntBASIC16.34■□□□□ 0.21
CLDN2P57739 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN2P57739 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN2P57739 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLDN2P57739 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN2P57739 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CLDN2P57739 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.33■□□□□ 0.21
CLDN2P57739 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN2P57739 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN2P57739 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN2P57739 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN2P57739 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN2P57739 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN2P57739 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 HLA-H-201ENST00000383620 1096 ntBASIC16.33■□□□□ 0.2
CLDN2P57739 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CLDN2P57739 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN2P57739 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 AC027369.6-201ENST00000525520 931 ntBASIC16.33■□□□□ 0.2
CLDN2P57739 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN2P57739 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
CLDN2P57739 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.33■□□□□ 0.2
CLDN2P57739 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN2P57739 RN7SL204P-201ENST00000582831 262 ntBASIC16.33■□□□□ 0.2
CLDN2P57739 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CLDN2P57739 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN2P57739 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN2P57739 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN2P57739 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLDN2P57739 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN2P57739 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN2P57739 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLDN2P57739 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.32■□□□□ 0.2
CLDN2P57739 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms