Protein–RNA interactions for Protein: P56181

NDUFV3, NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV3P56181 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFV3P56181 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
NDUFV3P56181 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFV3P56181 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
NDUFV3P56181 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFV3P56181 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFV3P56181 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFV3P56181 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFV3P56181 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFV3P56181 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFV3P56181 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
NDUFV3P56181 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFV3P56181 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFV3P56181 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFV3P56181 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFV3P56181 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC10.84□□□□□ -0.67
NDUFV3P56181 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFV3P56181 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NDUFV3P56181 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
NDUFV3P56181 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.67
NDUFV3P56181 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
NDUFV3P56181 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC10.83□□□□□ -0.68
NDUFV3P56181 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
NDUFV3P56181 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC10.83□□□□□ -0.68
NDUFV3P56181 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC10.83□□□□□ -0.68
NDUFV3P56181 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC10.83□□□□□ -0.68
NDUFV3P56181 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
NDUFV3P56181 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
NDUFV3P56181 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
NDUFV3P56181 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC10.83□□□□□ -0.68
NDUFV3P56181 AP002982.1-201ENST00000492365 877 ntBASIC10.83□□□□□ -0.68
NDUFV3P56181 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
NDUFV3P56181 RARRES2P10-201ENST00000564312 460 ntBASIC10.83□□□□□ -0.68
NDUFV3P56181 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC10.83□□□□□ -0.68
NDUFV3P56181 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC10.83□□□□□ -0.68
NDUFV3P56181 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC10.83□□□□□ -0.68
NDUFV3P56181 AC080038.1-201ENST00000611274 1154 ntBASIC10.83□□□□□ -0.68
NDUFV3P56181 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC10.83□□□□□ -0.68
NDUFV3P56181 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
NDUFV3P56181 AC073111.5-205ENST00000641717 521 ntBASIC10.83□□□□□ -0.68
NDUFV3P56181 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 BLK-205ENST00000529894 2017 ntTSL 5 BASIC10.83□□□□□ -0.68
NDUFV3P56181 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC10.83□□□□□ -0.68
NDUFV3P56181 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
NDUFV3P56181 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
NDUFV3P56181 CES1P1-201ENST00000421606 1704 ntBASIC10.83□□□□□ -0.68
NDUFV3P56181 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC10.83□□□□□ -0.68
NDUFV3P56181 LINC02012-201ENST00000608206 1725 ntBASIC10.83□□□□□ -0.68
NDUFV3P56181 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC10.83□□□□□ -0.68
NDUFV3P56181 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
NDUFV3P56181 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.83□□□□□ -0.68
NDUFV3P56181 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
NDUFV3P56181 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC10.83□□□□□ -0.68
NDUFV3P56181 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFV3P56181 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
NDUFV3P56181 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC10.82□□□□□ -0.68
NDUFV3P56181 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFV3P56181 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFV3P56181 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
NDUFV3P56181 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFV3P56181 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC10.82□□□□□ -0.68
NDUFV3P56181 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC10.82□□□□□ -0.68
NDUFV3P56181 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
NDUFV3P56181 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFV3P56181 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
NDUFV3P56181 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms