Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.48□□□□□ -0.09
ATP1B3P54709 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
ATP1B3P54709 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
ATP1B3P54709 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.48□□□□□ -0.09
ATP1B3P54709 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ATP1B3P54709 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
ATP1B3P54709 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.48□□□□□ -0.09
ATP1B3P54709 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
ATP1B3P54709 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 MIR1224-201ENST00000408193 85 ntBASIC14.48□□□□□ -0.09
ATP1B3P54709 UPK3BP1-201ENST00000428678 509 ntBASIC14.48□□□□□ -0.09
ATP1B3P54709 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.48□□□□□ -0.09
ATP1B3P54709 AC139887.3-201ENST00000568585 713 ntBASIC14.48□□□□□ -0.09
ATP1B3P54709 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.48□□□□□ -0.09
ATP1B3P54709 AL139424.1-201ENST00000607572 797 ntBASIC14.48□□□□□ -0.09
ATP1B3P54709 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.48□□□□□ -0.09
ATP1B3P54709 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.48□□□□□ -0.09
ATP1B3P54709 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.48□□□□□ -0.09
ATP1B3P54709 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.48□□□□□ -0.09
ATP1B3P54709 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.48□□□□□ -0.09
ATP1B3P54709 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATP1B3P54709 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ATP1B3P54709 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
ATP1B3P54709 AC006538.1-201ENST00000567905 1585 ntBASIC14.47□□□□□ -0.09
ATP1B3P54709 AL136379.1-201ENST00000623471 2642 ntBASIC14.47□□□□□ -0.09
ATP1B3P54709 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
ATP1B3P54709 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ATP1B3P54709 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
ATP1B3P54709 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.47□□□□□ -0.09
ATP1B3P54709 AC092364.2-201ENST00000596710 2692 ntBASIC14.47□□□□□ -0.09
ATP1B3P54709 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.47□□□□□ -0.09
ATP1B3P54709 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.47□□□□□ -0.09
ATP1B3P54709 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.47□□□□□ -0.09
ATP1B3P54709 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.47□□□□□ -0.09
ATP1B3P54709 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.47□□□□□ -0.09
ATP1B3P54709 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.47□□□□□ -0.09
ATP1B3P54709 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.47□□□□□ -0.09
ATP1B3P54709 AC013467.2-201ENST00000605472 835 ntBASIC14.47□□□□□ -0.09
ATP1B3P54709 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ATP1B3P54709 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.47□□□□□ -0.09
ATP1B3P54709 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
ATP1B3P54709 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.47□□□□□ -0.09
ATP1B3P54709 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ATP1B3P54709 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.47□□□□□ -0.09
ATP1B3P54709 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ATP1B3P54709 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATP1B3P54709 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ATP1B3P54709 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.46□□□□□ -0.09
ATP1B3P54709 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ATP1B3P54709 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.46□□□□□ -0.09
ATP1B3P54709 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.46□□□□□ -0.09
ATP1B3P54709 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATP1B3P54709 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATP1B3P54709 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ATP1B3P54709 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATP1B3P54709 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATP1B3P54709 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms