Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATXN3P54252 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ATXN3P54252 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
ATXN3P54252 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
ATXN3P54252 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATXN3P54252 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ATXN3P54252 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 AC009336.1-201ENST00000608941 1553 ntBASIC17.04■□□□□ 0.32
ATXN3P54252 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ATXN3P54252 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ATXN3P54252 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
ATXN3P54252 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.04■□□□□ 0.32
ATXN3P54252 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.04■□□□□ 0.32
ATXN3P54252 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.04■□□□□ 0.32
ATXN3P54252 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.04■□□□□ 0.32
ATXN3P54252 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.04■□□□□ 0.32
ATXN3P54252 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.04■□□□□ 0.32
ATXN3P54252 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.04■□□□□ 0.32
ATXN3P54252 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
ATXN3P54252 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.04■□□□□ 0.32
ATXN3P54252 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ATXN3P54252 AC022145.2-201ENST00000598203 171 ntBASIC17.04■□□□□ 0.32
ATXN3P54252 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.04■□□□□ 0.32
ATXN3P54252 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.04■□□□□ 0.32
ATXN3P54252 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATXN3P54252 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
ATXN3P54252 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.04■□□□□ 0.32
ATXN3P54252 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
ATXN3P54252 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.04■□□□□ 0.32
ATXN3P54252 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.04■□□□□ 0.32
ATXN3P54252 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATXN3P54252 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ATXN3P54252 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATXN3P54252 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATXN3P54252 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATXN3P54252 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
ATXN3P54252 AC011270.2-201ENST00000624293 2550 ntBASIC17.03■□□□□ 0.32
ATXN3P54252 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATXN3P54252 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.03■□□□□ 0.32
ATXN3P54252 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.03■□□□□ 0.32
ATXN3P54252 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATXN3P54252 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATXN3P54252 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.03■□□□□ 0.32
ATXN3P54252 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATXN3P54252 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ATXN3P54252 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ATXN3P54252 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATXN3P54252 AL513480.1-201ENST00000451731 511 ntBASIC17.03■□□□□ 0.32
ATXN3P54252 TIMM8BP1-201ENST00000452384 211 ntBASIC17.03■□□□□ 0.32
ATXN3P54252 AC093214.1-201ENST00000511688 1107 ntBASIC17.03■□□□□ 0.32
ATXN3P54252 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.03■□□□□ 0.32
ATXN3P54252 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATXN3P54252 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.03■□□□□ 0.32
ATXN3P54252 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.03■□□□□ 0.32
ATXN3P54252 AC005498.2-205ENST00000593218 784 ntBASIC17.03■□□□□ 0.32
ATXN3P54252 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ATXN3P54252 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATXN3P54252 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATXN3P54252 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.03■□□□□ 0.32
ATXN3P54252 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATXN3P54252 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATXN3P54252 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATXN3P54252 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATXN3P54252 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ATXN3P54252 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATXN3P54252 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATXN3P54252 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATXN3P54252 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATXN3P54252 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATXN3P54252 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ATXN3P54252 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATXN3P54252 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATXN3P54252 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ATXN3P54252 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
ATXN3P54252 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.02■□□□□ 0.32
ATXN3P54252 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATXN3P54252 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATXN3P54252 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATXN3P54252 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATXN3P54252 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATXN3P54252 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.02■□□□□ 0.32
ATXN3P54252 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATXN3P54252 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.02■□□□□ 0.32
ATXN3P54252 INGX-202ENST00000489074 768 ntBASIC17.02■□□□□ 0.32
ATXN3P54252 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.02■□□□□ 0.32
ATXN3P54252 AC109322.1-201ENST00000524499 1264 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms