Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.73■□□□□ 0.59
USP11P51784 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.73■□□□□ 0.59
USP11P51784 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.73■□□□□ 0.59
USP11P51784 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP11P51784 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP11P51784 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.73■□□□□ 0.59
USP11P51784 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP11P51784 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
USP11P51784 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
USP11P51784 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
USP11P51784 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.73■□□□□ 0.59
USP11P51784 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.73■□□□□ 0.59
USP11P51784 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP11P51784 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP11P51784 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
USP11P51784 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP11P51784 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP11P51784 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
USP11P51784 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP11P51784 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP11P51784 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.72■□□□□ 0.59
USP11P51784 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP11P51784 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP11P51784 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP11P51784 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP11P51784 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP11P51784 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.72■□□□□ 0.59
USP11P51784 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.72■□□□□ 0.59
USP11P51784 AL627223.1-201ENST00000416693 442 ntBASIC18.72■□□□□ 0.59
USP11P51784 AC093724.1-201ENST00000448659 1027 ntBASIC18.72■□□□□ 0.59
USP11P51784 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.72■□□□□ 0.59
USP11P51784 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.72■□□□□ 0.59
USP11P51784 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.72■□□□□ 0.59
USP11P51784 AP000842.3-202ENST00000569238 1080 ntBASIC18.72■□□□□ 0.59
USP11P51784 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.72■□□□□ 0.59
USP11P51784 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.72■□□□□ 0.59
USP11P51784 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.72■□□□□ 0.59
USP11P51784 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
USP11P51784 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP11P51784 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
USP11P51784 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.72■□□□□ 0.59
USP11P51784 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.72■□□□□ 0.59
USP11P51784 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP11P51784 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP11P51784 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP11P51784 ME2P1-201ENST00000426028 1970 ntBASIC18.72■□□□□ 0.59
USP11P51784 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.72■□□□□ 0.59
USP11P51784 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
USP11P51784 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.71■□□□□ 0.59
USP11P51784 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
USP11P51784 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
USP11P51784 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP11P51784 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.71■□□□□ 0.59
USP11P51784 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP11P51784 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.71■□□□□ 0.59
USP11P51784 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP11P51784 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP11P51784 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
USP11P51784 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP11P51784 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP11P51784 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.71■□□□□ 0.59
USP11P51784 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.71■□□□□ 0.59
USP11P51784 AC005237.2-201ENST00000434368 219 ntBASIC18.71■□□□□ 0.59
USP11P51784 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.71■□□□□ 0.59
USP11P51784 POU5F1P6-201ENST00000466990 990 ntBASIC18.71■□□□□ 0.59
USP11P51784 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.71■□□□□ 0.59
USP11P51784 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
USP11P51784 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP11P51784 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.71■□□□□ 0.59
USP11P51784 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP11P51784 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
USP11P51784 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.71■□□□□ 0.59
USP11P51784 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP11P51784 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP11P51784 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.71■□□□□ 0.58
USP11P51784 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.7■□□□□ 0.58
USP11P51784 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.7■□□□□ 0.58
USP11P51784 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
USP11P51784 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
USP11P51784 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.7■□□□□ 0.58
USP11P51784 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.7■□□□□ 0.58
USP11P51784 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.7■□□□□ 0.58
USP11P51784 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.7■□□□□ 0.58
USP11P51784 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.7■□□□□ 0.58
USP11P51784 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.7■□□□□ 0.58
USP11P51784 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.7■□□□□ 0.58
USP11P51784 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP11P51784 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.7■□□□□ 0.58
USP11P51784 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
USP11P51784 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms