Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CCR9P51686 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCR9P51686 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.69□□□□□ -0.06
CCR9P51686 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CCR9P51686 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CCR9P51686 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCR9P51686 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.69□□□□□ -0.06
CCR9P51686 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCR9P51686 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.69□□□□□ -0.06
CCR9P51686 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCR9P51686 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.69□□□□□ -0.06
CCR9P51686 MIR3180-1-201ENST00000580374 94 ntBASIC14.69□□□□□ -0.06
CCR9P51686 MIR3180-3-201ENST00000584616 94 ntBASIC14.69□□□□□ -0.06
CCR9P51686 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.69□□□□□ -0.06
CCR9P51686 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
CCR9P51686 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CCR9P51686 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.69□□□□□ -0.06
CCR9P51686 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCR9P51686 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.69□□□□□ -0.06
CCR9P51686 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.69□□□□□ -0.06
CCR9P51686 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCR9P51686 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
CCR9P51686 AC099063.4-201ENST00000641099 1602 ntBASIC14.69□□□□□ -0.06
CCR9P51686 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CCR9P51686 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCR9P51686 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCR9P51686 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.69□□□□□ -0.06
CCR9P51686 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCR9P51686 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CCR9P51686 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCR9P51686 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CCR9P51686 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.68□□□□□ -0.06
CCR9P51686 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.68□□□□□ -0.06
CCR9P51686 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCR9P51686 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCR9P51686 KRT8P39-201ENST00000396270 1433 ntBASIC14.68□□□□□ -0.06
CCR9P51686 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCR9P51686 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCR9P51686 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
CCR9P51686 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCR9P51686 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CCR9P51686 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CCR9P51686 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.68□□□□□ -0.06
CCR9P51686 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCR9P51686 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.68□□□□□ -0.06
CCR9P51686 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.68□□□□□ -0.06
CCR9P51686 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CCR9P51686 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCR9P51686 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.68□□□□□ -0.06
CCR9P51686 MIR4492-201ENST00000581627 80 ntBASIC14.68□□□□□ -0.06
CCR9P51686 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.68□□□□□ -0.06
CCR9P51686 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CCR9P51686 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCR9P51686 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCR9P51686 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCR9P51686 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCR9P51686 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCR9P51686 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CCR9P51686 IER3-202ENST00000376377 1350 ntBASIC14.68□□□□□ -0.06
CCR9P51686 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
CCR9P51686 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCR9P51686 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CCR9P51686 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCR9P51686 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.68□□□□□ -0.06
CCR9P51686 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CCR9P51686 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.68□□□□□ -0.06
CCR9P51686 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.67□□□□□ -0.06
CCR9P51686 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.67□□□□□ -0.06
CCR9P51686 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 AL512652.2-201ENST00000625156 1716 ntBASIC14.67□□□□□ -0.06
CCR9P51686 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.67□□□□□ -0.06
CCR9P51686 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CCR9P51686 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CCR9P51686 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.67□□□□□ -0.06
CCR9P51686 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CCR9P51686 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.67□□□□□ -0.06
CCR9P51686 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCR9P51686 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.67□□□□□ -0.06
CCR9P51686 PAWRP1-201ENST00000451083 565 ntBASIC14.67□□□□□ -0.06
CCR9P51686 AP000867.3-201ENST00000524675 377 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms