Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
MDH1P40925 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.73■□□□□ 0.27
MDH1P40925 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MDH1P40925 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.73■□□□□ 0.27
MDH1P40925 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
MDH1P40925 POU5F1P6-201ENST00000466990 990 ntBASIC16.73■□□□□ 0.27
MDH1P40925 AC128688.1-201ENST00000487626 519 ntBASIC16.73■□□□□ 0.27
MDH1P40925 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.73■□□□□ 0.27
MDH1P40925 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.73■□□□□ 0.27
MDH1P40925 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.73■□□□□ 0.27
MDH1P40925 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.73■□□□□ 0.27
MDH1P40925 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.73■□□□□ 0.27
MDH1P40925 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MDH1P40925 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.73■□□□□ 0.27
MDH1P40925 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.73■□□□□ 0.27
MDH1P40925 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
MDH1P40925 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MDH1P40925 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MDH1P40925 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MDH1P40925 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.72■□□□□ 0.27
MDH1P40925 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MDH1P40925 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MDH1P40925 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.72■□□□□ 0.27
MDH1P40925 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.72■□□□□ 0.27
MDH1P40925 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.72■□□□□ 0.27
MDH1P40925 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 AP002414.1-201ENST00000391405 1147 ntBASIC16.72■□□□□ 0.27
MDH1P40925 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.72■□□□□ 0.27
MDH1P40925 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.72■□□□□ 0.27
MDH1P40925 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.72■□□□□ 0.27
MDH1P40925 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.72■□□□□ 0.27
MDH1P40925 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.72■□□□□ 0.27
MDH1P40925 AC233702.5-201ENST00000584107 538 ntBASIC16.72■□□□□ 0.27
MDH1P40925 GPR32P1-201ENST00000601788 811 ntBASIC16.72■□□□□ 0.27
MDH1P40925 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.72■□□□□ 0.27
MDH1P40925 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.72■□□□□ 0.27
MDH1P40925 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.72■□□□□ 0.27
MDH1P40925 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MDH1P40925 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.72■□□□□ 0.27
MDH1P40925 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MDH1P40925 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MDH1P40925 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MDH1P40925 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.71■□□□□ 0.27
MDH1P40925 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MDH1P40925 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MDH1P40925 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
MDH1P40925 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.71■□□□□ 0.27
MDH1P40925 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MDH1P40925 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
MDH1P40925 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.71■□□□□ 0.27
MDH1P40925 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MDH1P40925 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MDH1P40925 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
MDH1P40925 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.71■□□□□ 0.27
MDH1P40925 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.71■□□□□ 0.27
MDH1P40925 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MDH1P40925 AC003669.1-201ENST00000334569 611 ntBASIC16.71■□□□□ 0.27
MDH1P40925 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MDH1P40925 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.71■□□□□ 0.27
MDH1P40925 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
MDH1P40925 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MDH1P40925 AC012618.2-201ENST00000428058 849 ntBASIC16.71■□□□□ 0.27
MDH1P40925 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MDH1P40925 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.71■□□□□ 0.27
MDH1P40925 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.71■□□□□ 0.27
MDH1P40925 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.71■□□□□ 0.27
MDH1P40925 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms