Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CD40LGP29965 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CD40LGP29965 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CD40LGP29965 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.79□□□□□ -0.04
CD40LGP29965 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.79□□□□□ -0.04
CD40LGP29965 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CD40LGP29965 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD40LGP29965 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD40LGP29965 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD40LGP29965 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD40LGP29965 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD40LGP29965 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CD40LGP29965 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD40LGP29965 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD40LGP29965 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.78□□□□□ -0.04
CD40LGP29965 AL137784.3-201ENST00000623858 2288 ntBASIC14.78□□□□□ -0.04
CD40LGP29965 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CD40LGP29965 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.78□□□□□ -0.04
CD40LGP29965 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CD40LGP29965 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.78□□□□□ -0.04
CD40LGP29965 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.78□□□□□ -0.04
CD40LGP29965 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.78□□□□□ -0.04
CD40LGP29965 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 GPR89P-201ENST00000407924 1495 ntBASIC14.78□□□□□ -0.04
CD40LGP29965 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.78□□□□□ -0.04
CD40LGP29965 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 KRT18P22-201ENST00000402024 1347 ntBASIC14.78□□□□□ -0.04
CD40LGP29965 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CD40LGP29965 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.78□□□□□ -0.04
CD40LGP29965 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.78□□□□□ -0.04
CD40LGP29965 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.78□□□□□ -0.04
CD40LGP29965 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.78□□□□□ -0.04
CD40LGP29965 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.78□□□□□ -0.04
CD40LGP29965 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CD40LGP29965 WWOX-216ENST00000569818 525 ntBASIC14.78□□□□□ -0.04
CD40LGP29965 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.78□□□□□ -0.04
CD40LGP29965 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CD40LGP29965 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CD40LGP29965 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.78□□□□□ -0.04
CD40LGP29965 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CD40LGP29965 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD40LGP29965 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD40LGP29965 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD40LGP29965 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
CD40LGP29965 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD40LGP29965 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD40LGP29965 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD40LGP29965 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD40LGP29965 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
CD40LGP29965 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
CD40LGP29965 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.04
CD40LGP29965 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD40LGP29965 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD40LGP29965 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CD40LGP29965 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD40LGP29965 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.77□□□□□ -0.04
CD40LGP29965 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD40LGP29965 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD40LGP29965 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD40LGP29965 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD40LGP29965 AL390955.1-201ENST00000428694 934 ntBASIC14.77□□□□□ -0.05
CD40LGP29965 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.77□□□□□ -0.05
CD40LGP29965 AC010653.2-201ENST00000623505 997 ntBASIC14.77□□□□□ -0.05
CD40LGP29965 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.77□□□□□ -0.05
CD40LGP29965 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD40LGP29965 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CD40LGP29965 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD40LGP29965 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD40LGP29965 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD40LGP29965 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD40LGP29965 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CD40LGP29965 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD40LGP29965 AC136621.1-201ENST00000624017 2304 ntBASIC14.77□□□□□ -0.05
CD40LGP29965 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.77□□□□□ -0.05
CD40LGP29965 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD40LGP29965 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms