Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD40P25942 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40P25942 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40P25942 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40P25942 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.3□□□□□ -0.12
CD40P25942 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.3□□□□□ -0.12
CD40P25942 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.3□□□□□ -0.12
CD40P25942 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD40P25942 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40P25942 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40P25942 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40P25942 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.3□□□□□ -0.12
CD40P25942 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.3□□□□□ -0.12
CD40P25942 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CD40P25942 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CD40P25942 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40P25942 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD40P25942 MIR770-201ENST00000390219 98 ntBASIC14.3□□□□□ -0.12
CD40P25942 AC142381.1-201ENST00000426099 345 ntBASIC14.3□□□□□ -0.12
CD40P25942 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40P25942 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.3□□□□□ -0.12
CD40P25942 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.3□□□□□ -0.12
CD40P25942 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.3□□□□□ -0.12
CD40P25942 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40P25942 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.3□□□□□ -0.12
CD40P25942 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.3□□□□□ -0.12
CD40P25942 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.3□□□□□ -0.12
CD40P25942 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.3□□□□□ -0.12
CD40P25942 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.3□□□□□ -0.12
CD40P25942 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.3□□□□□ -0.12
CD40P25942 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40P25942 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.3□□□□□ -0.12
CD40P25942 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.3□□□□□ -0.12
CD40P25942 TUBB3P1-201ENST00000405796 1332 ntBASIC14.3□□□□□ -0.12
CD40P25942 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.3□□□□□ -0.12
CD40P25942 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.3□□□□□ -0.12
CD40P25942 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.3□□□□□ -0.12
CD40P25942 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.3□□□□□ -0.12
CD40P25942 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD40P25942 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD40P25942 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40P25942 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD40P25942 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.29□□□□□ -0.12
CD40P25942 AL512652.2-201ENST00000625156 1716 ntBASIC14.29□□□□□ -0.12
CD40P25942 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.29□□□□□ -0.12
CD40P25942 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CD40P25942 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.29□□□□□ -0.12
CD40P25942 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CD40P25942 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.29□□□□□ -0.12
CD40P25942 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CD40P25942 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.29□□□□□ -0.12
CD40P25942 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.29□□□□□ -0.12
CD40P25942 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.29□□□□□ -0.12
CD40P25942 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.29□□□□□ -0.12
CD40P25942 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.29□□□□□ -0.12
CD40P25942 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CD40P25942 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.29□□□□□ -0.12
CD40P25942 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.29□□□□□ -0.12
CD40P25942 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CD40P25942 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.29□□□□□ -0.12
CD40P25942 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.29□□□□□ -0.12
CD40P25942 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.29□□□□□ -0.12
CD40P25942 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CD40P25942 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CD40P25942 AC073439.1-201ENST00000624121 1774 ntBASIC14.29□□□□□ -0.12
CD40P25942 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 AC005915.1-201ENST00000624912 2018 ntBASIC14.29□□□□□ -0.12
CD40P25942 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD40P25942 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.29□□□□□ -0.12
CD40P25942 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CD40P25942 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms