Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO1P25800 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LMO1P25800 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO1P25800 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.98□□□□□ -0.17
LMO1P25800 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LMO1P25800 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO1P25800 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.98□□□□□ -0.17
LMO1P25800 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.98□□□□□ -0.17
LMO1P25800 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO1P25800 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LMO1P25800 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LMO1P25800 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO1P25800 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LMO1P25800 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.97□□□□□ -0.17
LMO1P25800 MTHFR-217ENST00000641820 1569 ntBASIC13.97□□□□□ -0.17
LMO1P25800 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.97□□□□□ -0.17
LMO1P25800 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LMO1P25800 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.97□□□□□ -0.17
LMO1P25800 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LMO1P25800 AC012569.1-201ENST00000591191 1524 ntBASIC13.97□□□□□ -0.17
LMO1P25800 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LMO1P25800 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.97□□□□□ -0.17
LMO1P25800 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.97□□□□□ -0.17
LMO1P25800 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.97□□□□□ -0.17
LMO1P25800 AC092910.1-201ENST00000482027 1129 ntBASIC13.97□□□□□ -0.17
LMO1P25800 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 AC093909.1-201ENST00000504731 1122 ntBASIC13.97□□□□□ -0.17
LMO1P25800 RNA5SP419-201ENST00000515908 135 ntBASIC13.97□□□□□ -0.17
LMO1P25800 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.97□□□□□ -0.17
LMO1P25800 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.97□□□□□ -0.17
LMO1P25800 AL662844.1-201ENST00000546340 181 ntBASIC13.97□□□□□ -0.17
LMO1P25800 MIR4515-201ENST00000584082 81 ntBASIC13.97□□□□□ -0.17
LMO1P25800 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LMO1P25800 MIR7706-201ENST00000613747 67 ntBASIC13.97□□□□□ -0.17
LMO1P25800 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.97□□□□□ -0.17
LMO1P25800 AC116407.3-201ENST00000623905 1129 ntBASIC13.97□□□□□ -0.17
LMO1P25800 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.97□□□□□ -0.17
LMO1P25800 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.97□□□□□ -0.17
LMO1P25800 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LMO1P25800 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.97□□□□□ -0.17
LMO1P25800 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LMO1P25800 AC099063.4-201ENST00000641099 1602 ntBASIC13.97□□□□□ -0.17
LMO1P25800 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO1P25800 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.97□□□□□ -0.17
LMO1P25800 AC126177.1-201ENST00000547829 2218 ntBASIC13.96□□□□□ -0.17
LMO1P25800 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
LMO1P25800 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LMO1P25800 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.96□□□□□ -0.17
LMO1P25800 GPAA1P2-202ENST00000606848 1787 ntBASIC13.96□□□□□ -0.17
LMO1P25800 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LMO1P25800 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LMO1P25800 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.96□□□□□ -0.17
LMO1P25800 LINC01144-201ENST00000626198 1710 ntBASIC13.96□□□□□ -0.17
LMO1P25800 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.96□□□□□ -0.17
LMO1P25800 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LMO1P25800 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.96□□□□□ -0.17
LMO1P25800 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LMO1P25800 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.96□□□□□ -0.17
LMO1P25800 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LMO1P25800 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LMO1P25800 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LMO1P25800 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LMO1P25800 CXCL1P1-201ENST00000502804 216 ntBASIC13.96□□□□□ -0.17
LMO1P25800 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.96□□□□□ -0.17
LMO1P25800 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.96□□□□□ -0.17
LMO1P25800 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LMO1P25800 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.96□□□□□ -0.17
LMO1P25800 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
LMO1P25800 AL049840.3-201ENST00000602669 611 ntBASIC13.96□□□□□ -0.17
LMO1P25800 ACTL9-202ENST00000612068 1252 ntBASIC13.96□□□□□ -0.17
LMO1P25800 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LMO1P25800 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
LMO1P25800 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LMO1P25800 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LMO1P25800 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LMO1P25800 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
LMO1P25800 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
LMO1P25800 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.96□□□□□ -0.18
LMO1P25800 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms