Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.1□□□□□ -0.15
VAMP1P23763 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.1□□□□□ -0.15
VAMP1P23763 GCSHP2-201ENST00000560971 527 ntBASIC14.1□□□□□ -0.15
VAMP1P23763 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 AC079602.3-201ENST00000623931 403 ntBASIC14.1□□□□□ -0.15
VAMP1P23763 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.1□□□□□ -0.15
VAMP1P23763 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VAMP1P23763 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.1□□□□□ -0.15
VAMP1P23763 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
VAMP1P23763 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
VAMP1P23763 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
VAMP1P23763 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.1□□□□□ -0.15
VAMP1P23763 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
VAMP1P23763 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.1□□□□□ -0.15
VAMP1P23763 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VAMP1P23763 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.09□□□□□ -0.15
VAMP1P23763 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.09□□□□□ -0.15
VAMP1P23763 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.09□□□□□ -0.15
VAMP1P23763 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.09□□□□□ -0.15
VAMP1P23763 IGHGP-201ENST00000390555 1178 ntBASIC14.09□□□□□ -0.15
VAMP1P23763 HMGA1P5-201ENST00000412453 271 ntBASIC14.09□□□□□ -0.15
VAMP1P23763 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.09□□□□□ -0.15
VAMP1P23763 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
VAMP1P23763 AC007967.3-201ENST00000434308 558 ntBASIC14.09□□□□□ -0.15
VAMP1P23763 RASA4DP-201ENST00000460726 1199 ntBASIC14.09□□□□□ -0.15
VAMP1P23763 AP003733.1-201ENST00000491725 852 ntBASIC14.09□□□□□ -0.15
VAMP1P23763 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
VAMP1P23763 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.09□□□□□ -0.15
VAMP1P23763 CD99P1-205ENST00000527459 561 ntBASIC14.09□□□□□ -0.15
VAMP1P23763 AC142381.4-202ENST00000563973 229 ntBASIC14.09□□□□□ -0.15
VAMP1P23763 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.09□□□□□ -0.15
VAMP1P23763 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
VAMP1P23763 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.09□□□□□ -0.15
VAMP1P23763 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.09□□□□□ -0.15
VAMP1P23763 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
VAMP1P23763 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.09□□□□□ -0.15
VAMP1P23763 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.09□□□□□ -0.15
VAMP1P23763 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.09□□□□□ -0.15
VAMP1P23763 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.09□□□□□ -0.15
VAMP1P23763 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VAMP1P23763 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.08□□□□□ -0.15
VAMP1P23763 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
VAMP1P23763 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VAMP1P23763 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.08□□□□□ -0.15
VAMP1P23763 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
VAMP1P23763 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
VAMP1P23763 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
VAMP1P23763 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
VAMP1P23763 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.08□□□□□ -0.15
VAMP1P23763 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VAMP1P23763 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
VAMP1P23763 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.08□□□□□ -0.15
VAMP1P23763 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.08□□□□□ -0.15
VAMP1P23763 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VAMP1P23763 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VAMP1P23763 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VAMP1P23763 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VAMP1P23763 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VAMP1P23763 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VAMP1P23763 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms