Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH3P22223 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CDH3P22223 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH3P22223 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH3P22223 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH3P22223 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDH3P22223 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 ACTL9-202ENST00000612068 1252 ntBASIC16.35■□□□□ 0.21
CDH3P22223 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CDH3P22223 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CDH3P22223 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDH3P22223 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH3P22223 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH3P22223 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH3P22223 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH3P22223 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH3P22223 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH3P22223 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH3P22223 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH3P22223 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH3P22223 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.34■□□□□ 0.21
CDH3P22223 AC074386.1-202ENST00000463561 864 ntBASIC16.34■□□□□ 0.21
CDH3P22223 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.34■□□□□ 0.21
CDH3P22223 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH3P22223 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH3P22223 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CDH3P22223 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH3P22223 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH3P22223 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH3P22223 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH3P22223 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH3P22223 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH3P22223 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH3P22223 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH3P22223 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.34■□□□□ 0.21
CDH3P22223 AC023824.1-201ENST00000562945 2975 ntBASIC16.34■□□□□ 0.21
CDH3P22223 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH3P22223 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH3P22223 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.33■□□□□ 0.21
CDH3P22223 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.33■□□□□ 0.21
CDH3P22223 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.33■□□□□ 0.21
CDH3P22223 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH3P22223 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CDH3P22223 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH3P22223 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDH3P22223 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH3P22223 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH3P22223 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH3P22223 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH3P22223 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH3P22223 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDH3P22223 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CDH3P22223 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.33■□□□□ 0.2
CDH3P22223 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH3P22223 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.33■□□□□ 0.2
CDH3P22223 AC107918.2-201ENST00000530817 355 ntBASIC16.33■□□□□ 0.2
CDH3P22223 AC005829.1-201ENST00000570002 483 ntBASIC16.33■□□□□ 0.2
CDH3P22223 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
CDH3P22223 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH3P22223 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH3P22223 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH3P22223 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH3P22223 AL691403.2-201ENST00000618460 490 ntBASIC16.33■□□□□ 0.2
CDH3P22223 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH3P22223 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH3P22223 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH3P22223 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH3P22223 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH3P22223 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH3P22223 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH3P22223 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH3P22223 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH3P22223 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH3P22223 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms