Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
CD53P19397 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CD53P19397 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD53P19397 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD53P19397 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CD53P19397 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.15■□□□□ 0.02
CD53P19397 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD53P19397 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.15■□□□□ 0.02
CD53P19397 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD53P19397 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.15■□□□□ 0.02
CD53P19397 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.15■□□□□ 0.02
CD53P19397 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CD53P19397 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.15■□□□□ 0.02
CD53P19397 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CD53P19397 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.15■□□□□ 0.02
CD53P19397 KRT18P27-201ENST00000427733 1299 ntBASIC15.15■□□□□ 0.02
CD53P19397 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.15■□□□□ 0.02
CD53P19397 AP006288.1-201ENST00000446065 395 ntBASIC15.15■□□□□ 0.02
CD53P19397 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.15■□□□□ 0.02
CD53P19397 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.15■□□□□ 0.02
CD53P19397 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.15■□□□□ 0.02
CD53P19397 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.15■□□□□ 0.02
CD53P19397 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.15■□□□□ 0.02
CD53P19397 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.15■□□□□ 0.02
CD53P19397 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.15■□□□□ 0.02
CD53P19397 PGM5P2-202ENST00000637225 1043 ntBASIC15.15■□□□□ 0.02
CD53P19397 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CD53P19397 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.15■□□□□ 0.02
CD53P19397 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD53P19397 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.15■□□□□ 0.02
CD53P19397 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
CD53P19397 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD53P19397 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.15■□□□□ 0.02
CD53P19397 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.15■□□□□ 0.02
CD53P19397 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD53P19397 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.14■□□□□ 0.02
CD53P19397 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD53P19397 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD53P19397 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.14■□□□□ 0.01
CD53P19397 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD53P19397 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD53P19397 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CD53P19397 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD53P19397 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CD53P19397 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CD53P19397 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CD53P19397 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD53P19397 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.14■□□□□ 0.01
CD53P19397 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.14■□□□□ 0.01
CD53P19397 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.14■□□□□ 0.01
CD53P19397 AC007967.3-201ENST00000434308 558 ntBASIC15.14■□□□□ 0.01
CD53P19397 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CD53P19397 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.14■□□□□ 0.01
CD53P19397 HLA-J-202ENST00000469281 1241 ntBASIC15.14■□□□□ 0.01
CD53P19397 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.14■□□□□ 0.01
CD53P19397 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.14■□□□□ 0.01
CD53P19397 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.14■□□□□ 0.01
CD53P19397 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD53P19397 AC006557.2-201ENST00000592985 1240 ntBASIC15.14■□□□□ 0.01
CD53P19397 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.14■□□□□ 0.01
CD53P19397 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.14■□□□□ 0.01
CD53P19397 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD53P19397 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.14■□□□□ 0.01
CD53P19397 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.14■□□□□ 0.01
CD53P19397 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD53P19397 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD53P19397 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD53P19397 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.14■□□□□ 0.01
CD53P19397 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD53P19397 KRT18P28-201ENST00000453838 1332 ntBASIC15.14■□□□□ 0.01
CD53P19397 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD53P19397 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CD53P19397 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD53P19397 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD53P19397 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD53P19397 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD53P19397 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CD53P19397 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD53P19397 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD53P19397 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.13■□□□□ 0.01
CD53P19397 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD53P19397 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.13■□□□□ 0.01
CD53P19397 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD53P19397 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.13■□□□□ 0.01
CD53P19397 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD53P19397 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD53P19397 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD53P19397 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD53P19397 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD53P19397 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
CD53P19397 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CD53P19397 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD53P19397 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.13■□□□□ 0.01
CD53P19397 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD53P19397 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD53P19397 AL391256.1-201ENST00000443260 1855 ntBASIC15.13■□□□□ 0.01
CD53P19397 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD53P19397 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.13■□□□□ 0.01
CD53P19397 AC108751.1-201ENST00000490852 363 ntBASIC15.13■□□□□ 0.01
CD53P19397 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms