Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BMP3P12645 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BMP3P12645 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BMP3P12645 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BMP3P12645 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BMP3P12645 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BMP3P12645 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
BMP3P12645 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BMP3P12645 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.06■□□□□ 0.64
BMP3P12645 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BMP3P12645 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
BMP3P12645 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
BMP3P12645 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
BMP3P12645 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
BMP3P12645 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.06■□□□□ 0.64
BMP3P12645 AC012313.1-201ENST00000593393 3059 ntBASIC19.06■□□□□ 0.64
BMP3P12645 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BMP3P12645 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.06■□□□□ 0.64
BMP3P12645 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BMP3P12645 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.06■□□□□ 0.64
BMP3P12645 AC027369.6-201ENST00000525520 931 ntBASIC19.06■□□□□ 0.64
BMP3P12645 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BMP3P12645 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.06■□□□□ 0.64
BMP3P12645 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.06■□□□□ 0.64
BMP3P12645 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.06■□□□□ 0.64
BMP3P12645 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BMP3P12645 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BMP3P12645 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
BMP3P12645 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
BMP3P12645 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
BMP3P12645 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
BMP3P12645 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
BMP3P12645 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
BMP3P12645 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BMP3P12645 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
BMP3P12645 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
BMP3P12645 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BMP3P12645 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.05■□□□□ 0.64
BMP3P12645 RNF216P1-203ENST00000404404 2427 ntBASIC19.05■□□□□ 0.64
BMP3P12645 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BMP3P12645 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BMP3P12645 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BMP3P12645 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.05■□□□□ 0.64
BMP3P12645 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BMP3P12645 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.05■□□□□ 0.64
BMP3P12645 AC078925.2-201ENST00000624013 1973 ntBASIC19.05■□□□□ 0.64
BMP3P12645 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BMP3P12645 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.05■□□□□ 0.64
BMP3P12645 UGT1A2P-201ENST00000454886 866 ntBASIC19.05■□□□□ 0.64
BMP3P12645 AL512638.1-201ENST00000457493 794 ntBASIC19.05■□□□□ 0.64
BMP3P12645 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.05■□□□□ 0.64
BMP3P12645 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
BMP3P12645 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.05■□□□□ 0.64
BMP3P12645 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.05■□□□□ 0.64
BMP3P12645 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.05■□□□□ 0.64
BMP3P12645 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BMP3P12645 SPDYE12P-201ENST00000618416 771 ntBASIC19.05■□□□□ 0.64
BMP3P12645 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BMP3P12645 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
BMP3P12645 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BMP3P12645 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.05■□□□□ 0.64
BMP3P12645 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BMP3P12645 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
BMP3P12645 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
BMP3P12645 AL035456.1-201ENST00000456064 1369 ntBASIC19.05■□□□□ 0.64
BMP3P12645 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.05■□□□□ 0.64
BMP3P12645 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.05■□□□□ 0.64
BMP3P12645 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BMP3P12645 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
BMP3P12645 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.04■□□□□ 0.64
BMP3P12645 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 AC241585.1-201ENST00000433527 519 ntBASIC19.04■□□□□ 0.64
BMP3P12645 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.04■□□□□ 0.64
BMP3P12645 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.04■□□□□ 0.64
BMP3P12645 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.04■□□□□ 0.64
BMP3P12645 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.04■□□□□ 0.64
BMP3P12645 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.04■□□□□ 0.64
BMP3P12645 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.04■□□□□ 0.64
BMP3P12645 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.04■□□□□ 0.64
BMP3P12645 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.04■□□□□ 0.64
BMP3P12645 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 AL589702.1-201ENST00000641229 1509 ntBASIC19.04■□□□□ 0.64
BMP3P12645 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.04■□□□□ 0.64
BMP3P12645 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP3P12645 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms