Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 KRT18P27-201ENST00000427733 1299 ntBASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 PMS2P1-201ENST00000431037 1228 ntBASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 RN7SL510P-201ENST00000581311 263 ntBASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 MPDU1-223ENST00000582151 728 ntBASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 AC008735.5-201ENST00000623544 497 ntBASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
IGHV3-43DP0DP04 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 AC004870.1-201ENST00000315132 882 ntBASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 KRT18P67-201ENST00000432816 1264 ntBASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 AC018712.1-201ENST00000455767 687 ntBASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 HLA-J-202ENST00000469281 1241 ntBASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 AC105339.3-201ENST00000560043 636 ntBASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 AL356488.2-201ENST00000602755 427 ntBASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 AL031008.1-201ENST00000619963 541 ntBASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
IGHV3-43DP0DP04 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms