Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.12■□□□□ 0.01
HMGN1P05114 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.12■□□□□ 0.01
HMGN1P05114 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HMGN1P05114 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.12■□□□□ 0.01
HMGN1P05114 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HMGN1P05114 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.12■□□□□ 0.01
HMGN1P05114 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 AC006449.6-201ENST00000612330 2296 ntBASIC15.12■□□□□ 0.01
HMGN1P05114 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGN1P05114 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 NCF1C-201ENST00000438382 1427 ntBASIC15.11■□□□□ 0.01
HMGN1P05114 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 PAUPAR-201ENST00000630360 2965 ntBASIC15.11■□□□□ 0.01
HMGN1P05114 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGN1P05114 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HMGN1P05114 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.11■□□□□ 0.01
HMGN1P05114 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
HMGN1P05114 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.11■□□□□ 0.01
HMGN1P05114 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HMGN1P05114 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HMGN1P05114 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.11■□□□□ 0.01
HMGN1P05114 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGN1P05114 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.11■□□□□ 0.01
HMGN1P05114 POU5F1P6-201ENST00000466990 990 ntBASIC15.11■□□□□ 0.01
HMGN1P05114 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGN1P05114 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.11■□□□□ 0.01
HMGN1P05114 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.11■□□□□ 0.01
HMGN1P05114 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGN1P05114 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGN1P05114 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HMGN1P05114 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
HMGN1P05114 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HMGN1P05114 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HMGN1P05114 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 AL671710.1-201ENST00000610245 2349 ntBASIC15.11■□□□□ 0.01
HMGN1P05114 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HMGN1P05114 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 AL512652.2-201ENST00000625156 1716 ntBASIC15.11■□□□□ 0.01
HMGN1P05114 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGN1P05114 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 AC132872.4-202ENST00000622924 2756 ntBASIC15.11■□□□□ 0.01
HMGN1P05114 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HMGN1P05114 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGN1P05114 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.11■□□□□ 0.01
HMGN1P05114 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HMGN1P05114 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
HMGN1P05114 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGN1P05114 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGN1P05114 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMGN1P05114 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGN1P05114 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HMGN1P05114 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMGN1P05114 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMGN1P05114 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HMGN1P05114 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGN1P05114 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HMGN1P05114 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HMGN1P05114 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGN1P05114 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
HMGN1P05114 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGN1P05114 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGN1P05114 RCN1P1-201ENST00000400413 996 ntBASIC15.1■□□□□ 0.01
HMGN1P05114 MPDU1-223ENST00000582151 728 ntBASIC15.1■□□□□ 0.01
HMGN1P05114 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.1■□□□□ 0.01
HMGN1P05114 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
HMGN1P05114 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMGN1P05114 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMGN1P05114 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGN1P05114 SNX33P1-201ENST00000592116 1762 ntBASIC15.1■□□□□ 0.01
HMGN1P05114 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGN1P05114 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGN1P05114 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGN1P05114 AC024909.3-201ENST00000611513 2257 ntBASIC15.1■□□□□ 0.01
HMGN1P05114 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGN1P05114 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.1■□□□□ 0.01
HMGN1P05114 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGN1P05114 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.1■□□□□ 0.01
HMGN1P05114 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms