Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04436 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.17■□□□□ 0.02
P04436 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.16■□□□□ 0.02
P04436 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
P04436 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
P04436 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.16■□□□□ 0.02
P04436 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
P04436 AC005915.1-201ENST00000624912 2018 ntBASIC15.16■□□□□ 0.02
P04436 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
P04436 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.16■□□□□ 0.02
P04436 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.16■□□□□ 0.02
P04436 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 RBPMS2P1-201ENST00000437762 623 ntBASIC15.16■□□□□ 0.02
P04436 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.16■□□□□ 0.02
P04436 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.16■□□□□ 0.02
P04436 AC027796.2-201ENST00000575326 344 ntBASIC15.16■□□□□ 0.02
P04436 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.16■□□□□ 0.02
P04436 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.16■□□□□ 0.02
P04436 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.16■□□□□ 0.02
P04436 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
P04436 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.16■□□□□ 0.02
P04436 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
P04436 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04436 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
P04436 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
P04436 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
P04436 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.15■□□□□ 0.02
P04436 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
P04436 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.15■□□□□ 0.02
P04436 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
P04436 AL139400.1-201ENST00000366220 510 ntBASIC15.15■□□□□ 0.02
P04436 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.15■□□□□ 0.02
P04436 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.15■□□□□ 0.02
P04436 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.15■□□□□ 0.02
P04436 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.15■□□□□ 0.02
P04436 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
P04436 LINC01225-203ENST00000563550 1244 ntBASIC15.15■□□□□ 0.02
P04436 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.15■□□□□ 0.02
P04436 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.15■□□□□ 0.02
P04436 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.15■□□□□ 0.02
P04436 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
P04436 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.15■□□□□ 0.02
P04436 SNX33P1-201ENST00000592116 1762 ntBASIC15.15■□□□□ 0.02
P04436 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
P04436 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
P04436 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.15■□□□□ 0.02
P04436 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04436 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
P04436 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.14■□□□□ 0.02
P04436 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
P04436 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms