Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
UBL3O95164 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.97□□□□□ -0.01
UBL3O95164 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
UBL3O95164 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
UBL3O95164 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
UBL3O95164 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBL3O95164 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.96□□□□□ -0.01
UBL3O95164 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.96□□□□□ -0.01
UBL3O95164 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.96□□□□□ -0.01
UBL3O95164 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 AC068418.2-201ENST00000577309 3703 ntBASIC14.96□□□□□ -0.01
UBL3O95164 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.96□□□□□ -0.01
UBL3O95164 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
UBL3O95164 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 PTCHD3P3-201ENST00000403073 906 ntBASIC14.96□□□□□ -0.01
UBL3O95164 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 AC092910.1-201ENST00000482027 1129 ntBASIC14.96□□□□□ -0.01
UBL3O95164 RPS15P9-201ENST00000494093 319 ntBASIC14.96□□□□□ -0.01
UBL3O95164 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
UBL3O95164 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.96□□□□□ -0.01
UBL3O95164 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.96□□□□□ -0.01
UBL3O95164 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.96□□□□□ -0.01
UBL3O95164 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.96□□□□□ -0.01
UBL3O95164 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
UBL3O95164 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
UBL3O95164 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBL3O95164 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.96□□□□□ -0.02
UBL3O95164 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
UBL3O95164 AC092364.2-201ENST00000596710 2692 ntBASIC14.96□□□□□ -0.02
UBL3O95164 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.96□□□□□ -0.02
UBL3O95164 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.96□□□□□ -0.02
UBL3O95164 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
UBL3O95164 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
UBL3O95164 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
UBL3O95164 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
UBL3O95164 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
UBL3O95164 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.95□□□□□ -0.02
UBL3O95164 HLA-A-201ENST00000376802 1334 ntBASIC14.95□□□□□ -0.02
UBL3O95164 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.95□□□□□ -0.02
UBL3O95164 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
UBL3O95164 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.95□□□□□ -0.02
UBL3O95164 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.95□□□□□ -0.02
UBL3O95164 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.95□□□□□ -0.02
UBL3O95164 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
UBL3O95164 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.95□□□□□ -0.02
UBL3O95164 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.95□□□□□ -0.02
UBL3O95164 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.95□□□□□ -0.02
UBL3O95164 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.95□□□□□ -0.02
UBL3O95164 AC012640.2-201ENST00000561606 901 ntBASIC14.95□□□□□ -0.02
UBL3O95164 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.95□□□□□ -0.02
UBL3O95164 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.95□□□□□ -0.02
UBL3O95164 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
UBL3O95164 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
UBL3O95164 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.95□□□□□ -0.02
UBL3O95164 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
UBL3O95164 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.95□□□□□ -0.02
UBL3O95164 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.95□□□□□ -0.02
UBL3O95164 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
UBL3O95164 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 AC243591.1-201ENST00000452967 1364 ntBASIC14.95□□□□□ -0.02
UBL3O95164 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
UBL3O95164 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
UBL3O95164 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 AP002414.3-201ENST00000589352 1468 ntBASIC14.95□□□□□ -0.02
UBL3O95164 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.95□□□□□ -0.02
UBL3O95164 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBL3O95164 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.95□□□□□ -0.02
UBL3O95164 PI4KAP1-204ENST00000612579 1703 ntBASIC14.95□□□□□ -0.02
UBL3O95164 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms