Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.72■□□□□ 0.27
GPC4O75487 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.72■□□□□ 0.27
GPC4O75487 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.72■□□□□ 0.27
GPC4O75487 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
GPC4O75487 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
GPC4O75487 GGTLC5P-201ENST00000617623 998 ntBASIC16.72■□□□□ 0.27
GPC4O75487 AC117500.6-201ENST00000624871 588 ntBASIC16.72■□□□□ 0.27
GPC4O75487 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GPC4O75487 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GPC4O75487 CICP6-201ENST00000457191 2729 ntBASIC16.72■□□□□ 0.27
GPC4O75487 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.72■□□□□ 0.27
GPC4O75487 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.72■□□□□ 0.27
GPC4O75487 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
GPC4O75487 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.72■□□□□ 0.27
GPC4O75487 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GPC4O75487 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
GPC4O75487 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GPC4O75487 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.71■□□□□ 0.27
GPC4O75487 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
GPC4O75487 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.71■□□□□ 0.27
GPC4O75487 AC006449.5-201ENST00000610658 2098 ntBASIC16.71■□□□□ 0.27
GPC4O75487 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.71■□□□□ 0.27
GPC4O75487 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.71■□□□□ 0.27
GPC4O75487 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.71■□□□□ 0.27
GPC4O75487 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
GPC4O75487 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.71■□□□□ 0.27
GPC4O75487 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GPC4O75487 AC087163.2-201ENST00000457299 853 ntBASIC16.71■□□□□ 0.27
GPC4O75487 AC092910.1-201ENST00000482027 1129 ntBASIC16.71■□□□□ 0.27
GPC4O75487 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.71■□□□□ 0.27
GPC4O75487 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.71■□□□□ 0.27
GPC4O75487 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.71■□□□□ 0.27
GPC4O75487 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.71■□□□□ 0.27
GPC4O75487 AC005593.1-201ENST00000624894 515 ntBASIC16.71■□□□□ 0.27
GPC4O75487 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
GPC4O75487 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPC4O75487 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.71■□□□□ 0.26
GPC4O75487 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
GPC4O75487 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
GPC4O75487 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
GPC4O75487 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
GPC4O75487 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
GPC4O75487 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.7■□□□□ 0.26
GPC4O75487 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GPC4O75487 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.7■□□□□ 0.26
GPC4O75487 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GPC4O75487 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.7■□□□□ 0.26
GPC4O75487 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.7■□□□□ 0.26
GPC4O75487 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.7■□□□□ 0.26
GPC4O75487 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.7■□□□□ 0.26
GPC4O75487 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.7■□□□□ 0.26
GPC4O75487 AC026396.1-201ENST00000419388 421 ntBASIC16.7■□□□□ 0.26
GPC4O75487 AC098831.1-202ENST00000438821 336 ntBASIC16.7■□□□□ 0.26
GPC4O75487 IGHV3-22-201ENST00000520721 359 ntBASIC16.7■□□□□ 0.26
GPC4O75487 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.7■□□□□ 0.26
GPC4O75487 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPC4O75487 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms