Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SORBS3O60504 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SORBS3O60504 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SORBS3O60504 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SORBS3O60504 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SORBS3O60504 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.67■□□□□ 0.58
SORBS3O60504 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.67■□□□□ 0.58
SORBS3O60504 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SORBS3O60504 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.67■□□□□ 0.58
SORBS3O60504 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.67■□□□□ 0.58
SORBS3O60504 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.67■□□□□ 0.58
SORBS3O60504 INGX-202ENST00000489074 768 ntBASIC18.67■□□□□ 0.58
SORBS3O60504 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.67■□□□□ 0.58
SORBS3O60504 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.67■□□□□ 0.58
SORBS3O60504 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.67■□□□□ 0.58
SORBS3O60504 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 AC015911.4-201ENST00000588022 1070 ntBASIC18.67■□□□□ 0.58
SORBS3O60504 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SORBS3O60504 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.67■□□□□ 0.58
SORBS3O60504 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SORBS3O60504 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.67■□□□□ 0.58
SORBS3O60504 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.67■□□□□ 0.58
SORBS3O60504 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SORBS3O60504 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.67■□□□□ 0.58
SORBS3O60504 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
SORBS3O60504 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SORBS3O60504 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.66■□□□□ 0.58
SORBS3O60504 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SORBS3O60504 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SORBS3O60504 FOXO1B-201ENST00000504678 1527 ntBASIC18.66■□□□□ 0.58
SORBS3O60504 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SORBS3O60504 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.66■□□□□ 0.58
SORBS3O60504 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SORBS3O60504 AL035633.1-201ENST00000406139 838 ntBASIC18.66■□□□□ 0.58
SORBS3O60504 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.66■□□□□ 0.58
SORBS3O60504 AC142381.1-201ENST00000426099 345 ntBASIC18.66■□□□□ 0.58
SORBS3O60504 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.66■□□□□ 0.58
SORBS3O60504 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.66■□□□□ 0.58
SORBS3O60504 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.66■□□□□ 0.58
SORBS3O60504 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.66■□□□□ 0.58
SORBS3O60504 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.66■□□□□ 0.58
SORBS3O60504 AC084121.4-201ENST00000641598 221 ntBASIC18.66■□□□□ 0.58
SORBS3O60504 AF228730.8-201ENST00000642140 221 ntBASIC18.66■□□□□ 0.58
SORBS3O60504 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SORBS3O60504 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SORBS3O60504 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SORBS3O60504 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SORBS3O60504 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SORBS3O60504 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.65■□□□□ 0.58
SORBS3O60504 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SORBS3O60504 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SORBS3O60504 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SORBS3O60504 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.65■□□□□ 0.58
SORBS3O60504 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
SORBS3O60504 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.65■□□□□ 0.58
SORBS3O60504 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SORBS3O60504 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.65■□□□□ 0.58
SORBS3O60504 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SORBS3O60504 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.65■□□□□ 0.58
SORBS3O60504 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.65■□□□□ 0.58
SORBS3O60504 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SORBS3O60504 AP3S2-216ENST00000617003 1561 ntBASIC18.65■□□□□ 0.58
SORBS3O60504 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.65■□□□□ 0.58
SORBS3O60504 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.65■□□□□ 0.58
SORBS3O60504 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SORBS3O60504 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SORBS3O60504 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SORBS3O60504 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms