Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 IGHV3-42-201ENST00000520410 361 ntBASIC16.49■□□□□ 0.23
PCDHGA12O60330 AC069120.2-201ENST00000524091 540 ntBASIC16.49■□□□□ 0.23
PCDHGA12O60330 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA12O60330 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 MIR3909-201ENST00000579518 119 ntBASIC16.49■□□□□ 0.23
PCDHGA12O60330 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 AL390754.1-201ENST00000619088 582 ntBASIC16.49■□□□□ 0.23
PCDHGA12O60330 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA12O60330 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA12O60330 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA12O60330 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA12O60330 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA12O60330 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA12O60330 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGA12O60330 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 AL512638.1-201ENST00000457493 794 ntBASIC16.48■□□□□ 0.23
PCDHGA12O60330 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.48■□□□□ 0.23
PCDHGA12O60330 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 ALG1L8P-201ENST00000533887 760 ntBASIC16.48■□□□□ 0.23
PCDHGA12O60330 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGA12O60330 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA12O60330 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.47■□□□□ 0.23
PCDHGA12O60330 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA12O60330 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA12O60330 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA12O60330 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA12O60330 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA12O60330 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA12O60330 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PCDHGA12O60330 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGA12O60330 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PCDHGA12O60330 MIR346-201ENST00000362234 95 ntBASIC16.47■□□□□ 0.23
PCDHGA12O60330 LYSMD4-203ENST00000378904 2122 ntBASIC16.47■□□□□ 0.23
PCDHGA12O60330 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA12O60330 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGA12O60330 GAPDHP21-201ENST00000450301 1010 ntBASIC16.47■□□□□ 0.23
PCDHGA12O60330 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA12O60330 AC097493.3-201ENST00000509725 367 ntBASIC16.47■□□□□ 0.23
PCDHGA12O60330 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA12O60330 MIR6080-201ENST00000617359 66 ntBASIC16.47■□□□□ 0.23
PCDHGA12O60330 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA12O60330 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA12O60330 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA12O60330 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA12O60330 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
PCDHGA12O60330 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA12O60330 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA12O60330 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA12O60330 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA12O60330 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA12O60330 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA12O60330 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA12O60330 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms