Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EXTL3O43909 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EXTL3O43909 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EXTL3O43909 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.99■□□□□ 0.47
EXTL3O43909 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EXTL3O43909 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EXTL3O43909 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EXTL3O43909 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.99■□□□□ 0.47
EXTL3O43909 RN7SL589P-201ENST00000481268 310 ntBASIC17.99■□□□□ 0.47
EXTL3O43909 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.99■□□□□ 0.47
EXTL3O43909 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
EXTL3O43909 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
EXTL3O43909 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EXTL3O43909 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.99■□□□□ 0.47
EXTL3O43909 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.99■□□□□ 0.47
EXTL3O43909 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EXTL3O43909 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EXTL3O43909 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
EXTL3O43909 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
EXTL3O43909 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
EXTL3O43909 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.99■□□□□ 0.47
EXTL3O43909 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
EXTL3O43909 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.99■□□□□ 0.47
EXTL3O43909 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
EXTL3O43909 ME2P1-201ENST00000426028 1970 ntBASIC17.99■□□□□ 0.47
EXTL3O43909 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
EXTL3O43909 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
EXTL3O43909 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
EXTL3O43909 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.98■□□□□ 0.47
EXTL3O43909 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
EXTL3O43909 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
EXTL3O43909 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
EXTL3O43909 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
EXTL3O43909 SPDYE11-202ENST00000450699 704 ntBASIC17.98■□□□□ 0.47
EXTL3O43909 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.98■□□□□ 0.47
EXTL3O43909 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.98■□□□□ 0.47
EXTL3O43909 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.98■□□□□ 0.47
EXTL3O43909 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.98■□□□□ 0.47
EXTL3O43909 KRT8P48-201ENST00000515599 1220 ntBASIC17.98■□□□□ 0.47
EXTL3O43909 AC243562.1-201ENST00000560672 389 ntBASIC17.98■□□□□ 0.47
EXTL3O43909 SPDYE9P-201ENST00000570642 692 ntBASIC17.98■□□□□ 0.47
EXTL3O43909 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.98■□□□□ 0.47
EXTL3O43909 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.98■□□□□ 0.47
EXTL3O43909 SPDYE10P-202ENST00000612005 668 ntBASIC17.98■□□□□ 0.47
EXTL3O43909 SPDYE8P-202ENST00000612377 668 ntBASIC17.98■□□□□ 0.47
EXTL3O43909 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
EXTL3O43909 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.98■□□□□ 0.47
EXTL3O43909 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.98■□□□□ 0.47
EXTL3O43909 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.98■□□□□ 0.47
EXTL3O43909 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.98■□□□□ 0.47
EXTL3O43909 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EXTL3O43909 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
EXTL3O43909 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.98■□□□□ 0.47
EXTL3O43909 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
EXTL3O43909 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
EXTL3O43909 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.98■□□□□ 0.47
EXTL3O43909 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
EXTL3O43909 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EXTL3O43909 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EXTL3O43909 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.97■□□□□ 0.47
EXTL3O43909 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.97■□□□□ 0.47
EXTL3O43909 AC084018.2-201ENST00000613093 2607 ntBASIC17.97■□□□□ 0.47
EXTL3O43909 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.97■□□□□ 0.47
EXTL3O43909 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EXTL3O43909 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.97■□□□□ 0.47
EXTL3O43909 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.97■□□□□ 0.47
EXTL3O43909 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
EXTL3O43909 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.97■□□□□ 0.47
EXTL3O43909 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.97■□□□□ 0.47
EXTL3O43909 AC211486.1-202ENST00000416371 468 ntBASIC17.97■□□□□ 0.47
EXTL3O43909 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.97■□□□□ 0.47
EXTL3O43909 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.97■□□□□ 0.47
EXTL3O43909 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EXTL3O43909 AC211476.1-201ENST00000503899 468 ntBASIC17.97■□□□□ 0.47
EXTL3O43909 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.97■□□□□ 0.47
EXTL3O43909 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.97■□□□□ 0.47
EXTL3O43909 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.97■□□□□ 0.47
EXTL3O43909 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EXTL3O43909 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
EXTL3O43909 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EXTL3O43909 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EXTL3O43909 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EXTL3O43909 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EXTL3O43909 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms