Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
CLIC1O00299 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CLIC1O00299 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.71■□□□□ 0.11
CLIC1O00299 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CLIC1O00299 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 KRT18P35-201ENST00000510488 1269 ntBASIC15.71■□□□□ 0.11
CLIC1O00299 SART3-203ENST00000546611 1184 ntBASIC15.71■□□□□ 0.11
CLIC1O00299 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.71■□□□□ 0.11
CLIC1O00299 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.71■□□□□ 0.11
CLIC1O00299 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.71■□□□□ 0.11
CLIC1O00299 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.71■□□□□ 0.11
CLIC1O00299 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.71■□□□□ 0.11
CLIC1O00299 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLIC1O00299 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CLIC1O00299 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.71■□□□□ 0.11
CLIC1O00299 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLIC1O00299 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CLIC1O00299 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.71■□□□□ 0.1
CLIC1O00299 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLIC1O00299 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLIC1O00299 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CLIC1O00299 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.71■□□□□ 0.1
CLIC1O00299 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CLIC1O00299 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CLIC1O00299 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.7■□□□□ 0.1
CLIC1O00299 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.7■□□□□ 0.1
CLIC1O00299 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 GPAA1P2-202ENST00000606848 1787 ntBASIC15.7■□□□□ 0.1
CLIC1O00299 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CLIC1O00299 PCGF3-213ENST00000620529 1899 ntBASIC15.7■□□□□ 0.1
CLIC1O00299 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CLIC1O00299 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.7■□□□□ 0.1
CLIC1O00299 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.7■□□□□ 0.1
CLIC1O00299 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.7■□□□□ 0.1
CLIC1O00299 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLIC1O00299 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLIC1O00299 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.7■□□□□ 0.1
CLIC1O00299 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.7■□□□□ 0.1
CLIC1O00299 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.7■□□□□ 0.1
CLIC1O00299 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLIC1O00299 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.7■□□□□ 0.1
CLIC1O00299 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLIC1O00299 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLIC1O00299 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLIC1O00299 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLIC1O00299 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.69■□□□□ 0.1
CLIC1O00299 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.69■□□□□ 0.1
CLIC1O00299 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.69■□□□□ 0.1
CLIC1O00299 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLIC1O00299 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLIC1O00299 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.69■□□□□ 0.1
CLIC1O00299 LINC01144-201ENST00000626198 1710 ntBASIC15.69■□□□□ 0.1
CLIC1O00299 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLIC1O00299 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLIC1O00299 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.69■□□□□ 0.1
CLIC1O00299 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.69■□□□□ 0.1
CLIC1O00299 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLIC1O00299 PMS2P1-201ENST00000431037 1228 ntBASIC15.69■□□□□ 0.1
CLIC1O00299 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.69■□□□□ 0.1
CLIC1O00299 FGFR3P6-201ENST00000457012 610 ntBASIC15.69■□□□□ 0.1
CLIC1O00299 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.69■□□□□ 0.1
CLIC1O00299 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.69■□□□□ 0.1
CLIC1O00299 CYP2A7P1-201ENST00000595391 815 ntBASIC15.69■□□□□ 0.1
CLIC1O00299 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLIC1O00299 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLIC1O00299 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.69■□□□□ 0.1
CLIC1O00299 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLIC1O00299 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms