Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 KRT18P23-201ENST00000435622 1283 ntBASIC12.75□□□□□ -0.37
COLCA2A8K830 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.75□□□□□ -0.37
COLCA2A8K830 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.75□□□□□ -0.37
COLCA2A8K830 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 AC008677.1-201ENST00000519230 1561 ntBASIC12.75□□□□□ -0.37
COLCA2A8K830 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.75□□□□□ -0.37
COLCA2A8K830 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
COLCA2A8K830 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.75□□□□□ -0.37
COLCA2A8K830 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.75□□□□□ -0.37
COLCA2A8K830 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.75□□□□□ -0.37
COLCA2A8K830 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 AF213884.3-201ENST00000563833 479 ntBASIC12.75□□□□□ -0.37
COLCA2A8K830 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
COLCA2A8K830 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC12.75□□□□□ -0.37
COLCA2A8K830 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 SBF1P1-201ENST00000444527 5631 ntBASIC12.75□□□□□ -0.37
COLCA2A8K830 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.74□□□□□ -0.37
COLCA2A8K830 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.74□□□□□ -0.37
COLCA2A8K830 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 BX640514.1-201ENST00000583223 1918 ntBASIC12.74□□□□□ -0.37
COLCA2A8K830 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
COLCA2A8K830 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.74□□□□□ -0.37
COLCA2A8K830 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.74□□□□□ -0.37
COLCA2A8K830 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
COLCA2A8K830 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.74□□□□□ -0.37
COLCA2A8K830 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
COLCA2A8K830 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
COLCA2A8K830 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 RHOF-204ENST00000537265 699 ntTSL 2 BASIC12.74□□□□□ -0.37
COLCA2A8K830 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.74□□□□□ -0.37
COLCA2A8K830 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC12.74□□□□□ -0.37
COLCA2A8K830 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.74□□□□□ -0.37
COLCA2A8K830 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC12.74□□□□□ -0.37
COLCA2A8K830 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.74□□□□□ -0.37
COLCA2A8K830 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.74□□□□□ -0.37
COLCA2A8K830 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.74□□□□□ -0.37
COLCA2A8K830 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COLCA2A8K830 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.74□□□□□ -0.37
COLCA2A8K830 AC092127.1-201ENST00000567093 3455 ntBASIC12.74□□□□□ -0.37
COLCA2A8K830 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.74□□□□□ -0.37
COLCA2A8K830 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.73□□□□□ -0.37
COLCA2A8K830 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.73□□□□□ -0.37
COLCA2A8K830 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.73□□□□□ -0.37
COLCA2A8K830 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
COLCA2A8K830 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
COLCA2A8K830 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.73□□□□□ -0.37
COLCA2A8K830 KRT18P61-201ENST00000585825 1298 ntBASIC12.73□□□□□ -0.37
COLCA2A8K830 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
COLCA2A8K830 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
COLCA2A8K830 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.73□□□□□ -0.37
COLCA2A8K830 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.73□□□□□ -0.37
COLCA2A8K830 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.73□□□□□ -0.37
COLCA2A8K830 AL359881.3-201ENST00000602640 1721 ntBASIC12.73□□□□□ -0.37
COLCA2A8K830 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
COLCA2A8K830 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.73□□□□□ -0.37
COLCA2A8K830 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.73□□□□□ -0.37
COLCA2A8K830 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
COLCA2A8K830 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COLCA2A8K830 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
COLCA2A8K830 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms