Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 OR7E14P-202ENST00000530490 1290 ntBASIC17.28■□□□□ 0.36
SRRM3A6NNA2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 AC024563.2-201ENST00000603282 481 ntBASIC17.28■□□□□ 0.36
SRRM3A6NNA2 AL096865.1-201ENST00000606796 927 ntBASIC17.28■□□□□ 0.36
SRRM3A6NNA2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRRM3A6NNA2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 BCRP1-201ENST00000444246 691 ntBASIC17.27■□□□□ 0.36
SRRM3A6NNA2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 AC002558.1-201ENST00000488906 803 ntBASIC17.27■□□□□ 0.36
SRRM3A6NNA2 YBX1P5-201ENST00000509441 847 ntBASIC17.27■□□□□ 0.36
SRRM3A6NNA2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 UNC93B6-202ENST00000528242 690 ntBASIC17.27■□□□□ 0.36
SRRM3A6NNA2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRRM3A6NNA2 AC144831.1-201ENST00000573312 2656 ntBASIC17.27■□□□□ 0.35
SRRM3A6NNA2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SRRM3A6NNA2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRRM3A6NNA2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRRM3A6NNA2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRRM3A6NNA2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRRM3A6NNA2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SRRM3A6NNA2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SRRM3A6NNA2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRRM3A6NNA2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.27■□□□□ 0.35
SRRM3A6NNA2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
SRRM3A6NNA2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 AC113404.2-201ENST00000507884 177 ntBASIC17.26■□□□□ 0.35
SRRM3A6NNA2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SRRM3A6NNA2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms