Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AL035633.1-201ENST00000406139 838 ntBASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 TSPY16P-201ENST00000449843 468 ntBASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 COX20P2-201ENST00000452636 358 ntBASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TBC1D3FA6NER0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 AC027369.6-201ENST00000525520 931 ntBASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 SPTSSB-204ENST00000617024 1292 ntBASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.5■□□□□ 0.23
TBC1D3FA6NER0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 SNX33P1-201ENST00000592116 1762 ntBASIC16.49■□□□□ 0.23
TBC1D3FA6NER0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms