Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 SNX33P1-201ENST00000592116 1762 ntBASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 MIR4492-201ENST00000581627 80 ntBASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 AL732292.2-201ENST00000609649 430 ntBASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 AC093458.2-201ENST00000623150 629 ntBASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00959A0A1B0GUT2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 AL031731.1-201ENST00000642131 2094 ntBASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 PI4KAP1-204ENST00000612579 1703 ntBASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 AC131009.4-201ENST00000624048 1740 ntBASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 AC087163.2-201ENST00000457299 853 ntBASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 AC091167.2-201ENST00000579581 588 ntBASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 AC004706.3-202ENST00000621574 984 ntBASIC11.36□□□□□ -0.59
LINC00959A0A1B0GUT2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms