Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 AC015936.2-201ENST00000593177 259 ntBASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LOC102724428A0A0B4J2F2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 AC067852.2-201ENST00000590513 2313 ntBASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 BNIP3P42-201ENST00000454982 569 ntBASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 MIR4525-201ENST00000580000 75 ntBASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 BNIP3P29-201ENST00000598302 571 ntBASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 AC011447.5-201ENST00000616168 564 ntBASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 RPSAP52-203ENST00000622976 1023 ntBASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 AL645728.1-201ENST00000366221 2101 ntBASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 AL031731.1-201ENST00000642131 2094 ntBASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.87■□□□□ 0.93
LOC102724428A0A0B4J2F2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 HIST3H2BA-201ENST00000436555 524 ntBASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 RARRES2P5-201ENST00000564013 466 ntBASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LOC102724428A0A0B4J2F2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 CLK3P2-201ENST00000427566 1453 ntBASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LOC102724428A0A0B4J2F2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms