Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 LINC02199-201ENST00000506655 2702 ntBASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 AC087163.2-201ENST00000457299 853 ntBASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 AL662844.1-201ENST00000546340 181 ntBASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 AC005593.1-201ENST00000624894 515 ntBASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 FAM215A-202ENST00000632077 792 ntBASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
HLA-DRB4X5D2U9 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
HLA-DRB4X5D2U9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
HLA-DRB4X5D2U9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
HLA-DRB4X5D2U9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
HLA-DRB4X5D2U9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 AL031284.1-201ENST00000419297 478 ntBASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 AC093909.1-201ENST00000504731 1122 ntBASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 AC008667.4-201ENST00000607370 168 ntBASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 AC148477.8-201ENST00000624298 468 ntBASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 AC092850.2-201ENST00000623821 2697 ntBASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
HLA-DRB4X5D2U9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DRB4X5D2U9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms