Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHB1Q9Y5F3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 AC004461.1-201ENST00000412461 403 ntBASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 AC004835.2-201ENST00000603762 682 ntBASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 AL513210.1-201ENST00000629608 234 ntBASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 AC007064.4-201ENST00000637740 555 ntBASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 AC092902.6-201ENST00000641783 218 ntBASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB1Q9Y5F3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 SLC22A20-204ENST00000530038 1673 ntBASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 CYP2A7P1-201ENST00000595391 815 ntBASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 AC099398.1-201ENST00000567919 2776 ntBASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 KRT8P39-201ENST00000396270 1433 ntBASIC16.62■□□□□ 0.25
PCDHB1Q9Y5F3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 COX20P2-201ENST00000452636 358 ntBASIC16.61■□□□□ 0.25
PCDHB1Q9Y5F3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms