Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.49■□□□□ 0.87
UPF2Q9HAU5 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF2Q9HAU5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 AL603832.2-201ENST00000566195 2125 ntBASIC20.48■□□□□ 0.87
UPF2Q9HAU5 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 GGT4P-201ENST00000623672 1708 ntBASIC20.48■□□□□ 0.87
UPF2Q9HAU5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 LINC01238-205ENST00000567549 1107 ntBASIC20.48■□□□□ 0.87
UPF2Q9HAU5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 AC012306.2-201ENST00000609350 630 ntBASIC20.48■□□□□ 0.87
UPF2Q9HAU5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.48■□□□□ 0.87
UPF2Q9HAU5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.48■□□□□ 0.87
UPF2Q9HAU5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 AC006449.6-201ENST00000612330 2296 ntBASIC20.48■□□□□ 0.87
UPF2Q9HAU5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UPF2Q9HAU5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 AC068418.2-201ENST00000577309 3703 ntBASIC20.47■□□□□ 0.87
UPF2Q9HAU5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 AL161772.1-201ENST00000610494 4412 ntBASIC20.47■□□□□ 0.87
UPF2Q9HAU5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF2Q9HAU5 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC20.46■□□□□ 0.87
UPF2Q9HAU5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms