Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACSIN1Q9BY11 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 PCGF3-213ENST00000620529 1899 ntBASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 PRELID1P1-202ENST00000567272 903 ntBASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 AC107918.4-202ENST00000641623 219 ntBASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PACSIN1Q9BY11 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 AC073621.1-201ENST00000392730 636 ntBASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 LAGE3P1-201ENST00000425356 484 ntBASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 KRT18P27-201ENST00000427733 1299 ntBASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 SAPCD2P3-201ENST00000455031 850 ntBASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 SCARNA2-201ENST00000458748 420 ntBASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 RPS15P9-201ENST00000494093 319 ntBASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.71■□□□□ 0.43
PACSIN1Q9BY11 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
PACSIN1Q9BY11 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PACSIN1Q9BY11 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
PACSIN1Q9BY11 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PACSIN1Q9BY11 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms