Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 AL845331.1-201ENST00000424978 1190 ntBASIC9.99□□□□□ -0.81
LIMD2Q9BT23 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 S100A2-206ENST00000497140 697 ntTSL 2 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 AC124947.2-201ENST00000547118 1133 ntBASIC9.99□□□□□ -0.81
LIMD2Q9BT23 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 TPM1-226ENST00000560959 925 ntTSL 2 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 AC099336.1-202ENST00000602961 463 ntBASIC9.99□□□□□ -0.81
LIMD2Q9BT23 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LIMD2Q9BT23 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 EGFEM1P-202ENST00000431685 1563 ntBASIC9.98□□□□□ -0.81
LIMD2Q9BT23 KCP-203ENST00000610776 5108 ntTSL 5 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 NUS1P2-201ENST00000417358 873 ntBASIC9.98□□□□□ -0.81
LIMD2Q9BT23 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 ISCU-203ENST00000431221 799 ntTSL 2 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 ATP5G2P1-201ENST00000433580 426 ntBASIC9.98□□□□□ -0.81
LIMD2Q9BT23 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 NT5C-211ENST00000582170 653 ntTSL 3 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 GZMM-202ENST00000592501 941 ntTSL 3 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 AC093458.2-201ENST00000623150 629 ntBASIC9.98□□□□□ -0.81
LIMD2Q9BT23 AL358472.4-201ENST00000633140 710 ntBASIC9.98□□□□□ -0.81
LIMD2Q9BT23 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC9.98□□□□□ -0.81
LIMD2Q9BT23 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 220.1 ms