Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 OR6D1P-202ENST00000641007 5290 ntBASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 PCGF3-213ENST00000620529 1899 ntBASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 AC008677.1-201ENST00000519230 1561 ntBASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 AP3S2-216ENST00000617003 1561 ntBASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 AC015911.4-201ENST00000588022 1070 ntBASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM47Q9BQJ4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 AL355385.1-201ENST00000606123 409 ntBASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 SPTSSB-204ENST00000617024 1292 ntBASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM47Q9BQJ4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms