Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CHMP6Q96FZ7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 ZNF444P1-201ENST00000559497 298 ntBASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 AC111152.3-201ENST00000569699 673 ntBASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 GGT3P-204ENST00000453783 1664 ntBASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP6Q96FZ7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 PRAL-201ENST00000624952 3286 ntBASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 RNF152P1-201ENST00000397754 604 ntBASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 STARP1-201ENST00000397973 869 ntBASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 TSPY5P-201ENST00000426936 936 ntBASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 STK25P1-201ENST00000585406 838 ntBASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 AC079602.3-201ENST00000623931 403 ntBASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 AL049757.1-201ENST00000616842 1596 ntBASIC16.8■□□□□ 0.28
CHMP6Q96FZ7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms