Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 SIGLEC30P-201ENST00000455569 941 ntBASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 HLA-J-202ENST00000469281 1241 ntBASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 AC091304.2-201ENST00000564639 760 ntBASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 AP001269.4-201ENST00000609611 512 ntBASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 AL732292.2-201ENST00000609649 430 ntBASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 SIGLEC16-201ENST00000599858 1437 ntBASIC14.07□□□□□ -0.16
RTN4IP1Q8WWV3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 AC148477.5-201ENST00000625164 1645 ntBASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 AC079776.2-201ENST00000641154 1609 ntBASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 KRT18P56-201ENST00000507275 550 ntBASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 AC106795.1-205ENST00000512851 1056 ntBASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 CLEC4GP1-201ENST00000596555 870 ntBASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 AC073592.4-201ENST00000623827 446 ntBASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
RTN4IP1Q8WWV3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RTN4IP1Q8WWV3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms