Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SETD9Q8NE22 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SETD9Q8NE22 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.33■□□□□ 0.05
SETD9Q8NE22 TNRC18P2-201ENST00000417666 2714 ntBASIC15.33■□□□□ 0.05
SETD9Q8NE22 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SETD9Q8NE22 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SETD9Q8NE22 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SETD9Q8NE22 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SETD9Q8NE22 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SETD9Q8NE22 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SETD9Q8NE22 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SETD9Q8NE22 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SETD9Q8NE22 AL158047.1-201ENST00000445918 881 ntBASIC15.33■□□□□ 0.04
SETD9Q8NE22 LINC02447-202ENST00000501888 2146 ntBASIC15.33■□□□□ 0.04
SETD9Q8NE22 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 AL390719.2-201ENST00000606993 987 ntBASIC15.33■□□□□ 0.04
SETD9Q8NE22 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 AL023973.1-201ENST00000624619 620 ntBASIC15.33■□□□□ 0.04
SETD9Q8NE22 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 CDC14C-201ENST00000428251 1719 ntBASIC15.33■□□□□ 0.04
SETD9Q8NE22 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SETD9Q8NE22 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SETD9Q8NE22 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SETD9Q8NE22 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SETD9Q8NE22 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.33■□□□□ 0.04
SETD9Q8NE22 PCDHA3-202ENST00000532566 4594 ntBASIC15.33■□□□□ 0.04
SETD9Q8NE22 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 AC023157.3-201ENST00000619086 2088 ntBASIC15.32■□□□□ 0.04
SETD9Q8NE22 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.32■□□□□ 0.04
SETD9Q8NE22 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
SETD9Q8NE22 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.32■□□□□ 0.04
SETD9Q8NE22 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.32■□□□□ 0.04
SETD9Q8NE22 ACTG1P4-201ENST00000425123 1122 ntBASIC15.32■□□□□ 0.04
SETD9Q8NE22 TSPY7P-201ENST00000431358 1114 ntBASIC15.32■□□□□ 0.04
SETD9Q8NE22 POU5F1P6-201ENST00000466990 990 ntBASIC15.32■□□□□ 0.04
SETD9Q8NE22 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.32■□□□□ 0.04
SETD9Q8NE22 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 AL031432.5-201ENST00000641059 760 ntBASIC15.32■□□□□ 0.04
SETD9Q8NE22 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.32■□□□□ 0.04
SETD9Q8NE22 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.32■□□□□ 0.04
SETD9Q8NE22 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SETD9Q8NE22 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.32■□□□□ 0.04
SETD9Q8NE22 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.32■□□□□ 0.04
SETD9Q8NE22 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SETD9Q8NE22 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.32■□□□□ 0.04
SETD9Q8NE22 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
SETD9Q8NE22 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SETD9Q8NE22 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SETD9Q8NE22 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SETD9Q8NE22 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SETD9Q8NE22 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
SETD9Q8NE22 AC112504.1-201ENST00000623415 1841 ntBASIC15.31■□□□□ 0.04
SETD9Q8NE22 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SETD9Q8NE22 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.31■□□□□ 0.04
SETD9Q8NE22 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SETD9Q8NE22 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
SETD9Q8NE22 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SETD9Q8NE22 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SETD9Q8NE22 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SETD9Q8NE22 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms