Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 AC092171.3-201ENST00000610122 2651 ntBASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 UNC93B6-202ENST00000528242 690 ntBASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.19□□□□□ -0.3
TTC9CQ8N5M4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 HLA-A-201ENST00000376802 1334 ntBASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 CXCL1P1-201ENST00000502804 216 ntBASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 IGHV3-22-201ENST00000520721 359 ntBASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 MIR4751-201ENST00000578027 74 ntBASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 UBALD1-205ENST00000590891 2641 ntBASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TTC9CQ8N5M4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms