Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 AC124864.1-201ENST00000623408 392 ntBASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 AC006277.1-201ENST00000624348 1610 ntBASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 AC092384.3-202ENST00000564646 2873 ntBASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 AC005332.1-201ENST00000577698 1310 ntBASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 GGT3P-204ENST00000453783 1664 ntBASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM42Q8IWZ5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 AP002414.1-201ENST00000391405 1147 ntBASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 AL592071.1-201ENST00000611956 408 ntBASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 AP000550.4-202ENST00000639755 178 ntBASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM42Q8IWZ5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 SIGLEC30P-201ENST00000455569 941 ntBASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM42Q8IWZ5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 AC126177.1-201ENST00000547829 2218 ntBASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 IER3-202ENST00000376377 1350 ntBASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM42Q8IWZ5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms